Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M15
         (1174 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.74 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.74 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   5.2  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   5.2  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   5.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
 Frame = -3

Query: 407 NWEAPFGPLGLPSIN------FPQRPSWNREP 330
           +W+ PF P   P++       FPQRP W+  P
Sbjct: 286 DWQKPFYPGYYPTMTYSNGLPFPQRPIWSNFP 317


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
 Frame = -3

Query: 407 NWEAPFGPLGLPSIN------FPQRPSWNREP 330
           +W+ PF P   P++       FPQRP W+  P
Sbjct: 286 DWQKPFYPGYYPTMTYSNGLPFPQRPIWSNFP 317


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 311 GSAPG*RELAXFGNQVFLPF 252
           G  PG R++   GN VF PF
Sbjct: 46  GDVPGLRQVLPNGNLVFPPF 65


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 389 QRGLPNSIXKKXVRFKPNPWNSFGTKEEP 475
           QR +   + K  V  KP  W+S   K +P
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDP 111


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 389 QRGLPNSIXKKXVRFKPNPWNSFGTKEEP 475
           QR +   + K  V  KP  W+S   K +P
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDP 111


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 389 QRGLPNSIXKKXVRFKPNPWNSFGTKEEP 475
           QR +   + K  V  KP  W+S   K +P
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDP 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 302,552
Number of Sequences: 438
Number of extensions: 7613
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39885831
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)