Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M12
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.5  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   7.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.3  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 890 GXRRXVGXKGXQRXGXRXGXXGNPGXKGXXGXP 792
           G R   G +G Q      G  G PG  G  G P
Sbjct: 752 GLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLP 784



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -1

Query: 890 GXRRXVGXKGXQRXGXRXGXXGNPGXKGXXGXP 792
           G R   G +G +      G  G PG  G  G P
Sbjct: 54  GPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAP 86



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 890 GXRRXVGXKGXQRXGXRXGXXGNPGXKGXXGXP 792
           G R   G +G      R G  G PG  G  G P
Sbjct: 758 GARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEP 790


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 237 WNCLGVVFDV-LEEVGSVASHHRSLGQSDAGEENY 136
           +N +G+  D  LEE+G+       LG  DA  E+Y
Sbjct: 184 YNKVGIYVDKRLEELGANRVFELGLGDDDANIEDY 218


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 875 VGXKGXQRXGXRXGXXGNPGXKGXXGXP 792
           VG +G +    R G  G PG  G  G P
Sbjct: 141 VGLQGPKGDRGRDGLPGYPGIPGTNGVP 168



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = -1

Query: 872 GXKGXQRXGXRXGXXGNPGXKGXXGXPVXG 783
           G  G +    R G  G PG  G  G P  G
Sbjct: 377 GQSGPKGEPGRDGIPGQPGIAGPAGAPGGG 406



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 890 GXRRXVGXKGXQRXGXRXGXXGNPGXKGXXGXP 792
           G +   G +G      R G  G PG +G  G P
Sbjct: 586 GMKGDKGERGYAGEPGRPGASGVPGERGYPGMP 618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,233
Number of Sequences: 2352
Number of extensions: 11630
Number of successful extensions: 91
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)