Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M12
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 33 1.9
AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens ... 33 1.9
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 33 1.9
AB208784-1|BAD92021.1| 222|Homo sapiens zinc finger protein 76 ... 33 1.9
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 33 1.9
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 31 5.7
AK092577-1|BAC03917.1| 142|Homo sapiens oA ligase form XL-III. ... 31 5.7
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 31 5.7
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein. 31 5.7
AF065385-1|AAF13303.1| 431|Homo sapiens purinoceptor P2X6 protein. 31 7.6
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 784 PXTGXPXXPFXPGFPXXPXLXPXLXCPXXPTXLLQPP 894
P G P P PG P P L P P+ LL PP
Sbjct: 578 PPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPP 614
>AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ35759 fis, clone TESTI2004737. ).
Length = 710
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 784 PXTGXPXXPFXPGFPXXPXLXPXLXCPXXPTXLLQPP 894
P G P P PG P P L P P+ LL PP
Sbjct: 284 PPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPP 320
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 784 PXTGXPXXPFXPGFPXXPXLXPXLXCPXXPTXLLQPP 894
P G P P PG P P L P P+ LL PP
Sbjct: 578 PPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPP 614
>AB208784-1|BAD92021.1| 222|Homo sapiens zinc finger protein 76
(expressed in testis) variant protein.
Length = 222
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = -3
Query: 531 ARCSARRPCSFSRRAVAFFSTFRVGPCGAPRPCARCSASTVPKPPWPCRS 382
ARC A S S RA ST +P P A + T PPWPC S
Sbjct: 136 ARCQAAGNASPSTRAC--ISTTWCTHTASPTPAAPAARPTGRPPPWPCTS 183
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 784 PXTGXPXXPFXPGFPXXPXLXPXLXCPXXPTXLLQPP 894
P G P P PG P P L P P+ LL PP
Sbjct: 542 PPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPP 578
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 146 KRTTNLAAMMYCRETECGGDANQDCNTEEC 57
+RT N YC + G +Q CNTEEC
Sbjct: 1464 ERTCNPVYEKYCADHFADGRCDQGCNTEEC 1493
>AK092577-1|BAC03917.1| 142|Homo sapiens oA ligase form XL-III.
protein.
Length = 142
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 507 CSFSRRAVAFFSTFRVGPCGAPRPCARCSASTVPKPPWPCRS 382
C++ + + +R G GA PC +A T PPWP S
Sbjct: 16 CAWPMAPMGALAAWRSGMAGAGAPCVM-TAGTCAMPPWPAGS 56
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 146 KRTTNLAAMMYCRETECGGDANQDCNTEEC 57
+RT N YC + G +Q CNTEEC
Sbjct: 1464 ERTCNPVYEKYCADHFADGRCDQGCNTEEC 1493
>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
Length = 2281
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 146 KRTTNLAAMMYCRETECGGDANQDCNTEEC 57
+RT N YC + G +Q CNTEEC
Sbjct: 1424 ERTCNPVYEKYCADHFADGRCDQGCNTEEC 1453
>AF065385-1|AAF13303.1| 431|Homo sapiens purinoceptor P2X6 protein.
Length = 431
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = -3
Query: 492 RAVAFFSTFRVGPC----GAPRPCARCSASTVPKPPWPCRS 382
R +AF S R+ C AP P A + S P WPC S
Sbjct: 379 RELAFASQARLAECLRRSSAPAPTATAAGSQTQTPGWPCPS 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,522,887
Number of Sequences: 237096
Number of extensions: 1830283
Number of successful extensions: 9216
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9106
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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