Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M12
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical ... 30 2.0
AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 29 3.5
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 29 3.5
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 29 3.5
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 29 3.5
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 29 3.5
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 29 4.6
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 29 4.6
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 4.6
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 29 4.6
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 29 4.6
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 29 4.6
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 29 4.6
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 8.0
>AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical
protein Y6B3B.5a protein.
Length = 339
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 541 WDSCTVFCTAALQLLAEGGGVLLDVQGGPLRSSSA 437
WD+C A +L GG +LD++G PLR SSA
Sbjct: 281 WDTC-----AGDAILRTMGGAMLDLEGQPLRYSSA 310
>AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical
protein Y6B3B.5b protein.
Length = 348
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 541 WDSCTVFCTAALQLLAEGGGVLLDVQGGPLRSSSA 437
WD+C A +L GG +LD++G PLR SSA
Sbjct: 290 WDTC-----AGDAILRTMGGAMLDLEGQPLRYSSA 319
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 790 TGXPXXPFXPGFPXXPXLXP-XLXCPXXPTXLLQPP 894
TG P P P FP P L P P PT + PP
Sbjct: 504 TGAPVEPEFPQFPTFPTLSPHPQELPSLPTTKMAPP 539
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 SSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLT 263
S A S S+ HH S SL + G + A+ S L+QGHR P GS N+LT
Sbjct: 74 SGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS-----GNTLT 127
Query: 264 RSPSQRTHRTSA 299
RS Q + S+
Sbjct: 128 RSYHQPSSTNSS 139
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 359 CKTDCENPRKVEGQCCPVC 377
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 293 CKTDCENPRKVEGQCCPVC 311
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 293 CKTDCENPRKVEGQCCPVC 311
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 359 CKTDCENPRKVEGQCCPVC 377
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 293 CKTDCENPRKVEGQCCPVC 311
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 293 CKTDCENPRKVEGQCCPVC 311
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 293 CKTDCENPRKVEGQCCPVC 311
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 517 CRTPCRNPRSYRRRCPPTC 573
C+T C NPR +C P C
Sbjct: 293 CKTDCENPRKVEGQCCPVC 311
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 153 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 245
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,189,959
Number of Sequences: 27780
Number of extensions: 255628
Number of successful extensions: 1609
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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