Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M12
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   5.1  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   5.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = +1

Query: 202 FKDIEHHTKAVP*DFRTTV*LAHQVKGRTGLQQGLEGRLRVRAATAQRLRQESPXQRSET 381
           +K +E HT+      R    +    K    L+QG++  L +  A     R  SP + +E+
Sbjct: 332 YKQLELHTED-----RAAESILEPAKKGFKLKQGIQFHLYINTAPCGDARIFSPHEENES 386

Query: 382 RTARPRR 402
               P R
Sbjct: 387 VDKHPNR 393


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 112 VERLSAEEMRTRTATQRSVSK 50
           V  L+ EE++TR  T++SV K
Sbjct: 14  VGALTIEELKTRLHTEQSVCK 34


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 180 HHRSLGQSDAGEENYELGGHDVL 112
           HH+    + AG +   L GH VL
Sbjct: 920 HHQIQVSTSAGLQTIRLSGHSVL 942


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,103
Number of Sequences: 438
Number of extensions: 3305
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)