Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M11
(1080 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 46 9e-06
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.017
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.28
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.49
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.0
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.6
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 2.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 46.0 bits (104), Expect = 9e-06
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPPPXXXGGGG 850
PPP PPPPPP G PPPPPP GG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 965 PPPXXXXXXXXXPPPPPPXXXXGGXXPPPPPPXXXGGG 852
PPP PPPPP G PPPPPP GG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Frame = -1
Query: 996 KKKKXXXXAXPPPPXXXXXKXXPPPP---PPXXXXXGXAPPPPPPXXXGGGGXXXXXKKK 826
+++K + PPPP P P PP G PPPPPP G G
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Query: 825 KXXXGGGVFFFXXXPPPXKKKK 760
GG ++ P + K
Sbjct: 783 PAVSAGGSRYYAPAPQAEPEPK 804
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = -2
Query: 998 KKKKKXXXGXXPPPXXXXXXXXXPPP---PPPXXXXGGXXPPPPPPXXXGGGXXXGXXKK 828
+++K PPP P P PPP GG PPPPPP G G
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Query: 827 KKXXXGGXXFF 795
GG ++
Sbjct: 783 PAVSAGGSRYY 793
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 840 PXXXPPPPXXXGGGGGXPPPXXXXGGGGG 926
P PPPP G G PPP GG
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 852 PPPPXXXGGGGGXPPPXXXXGGGGGG 929
PPPP G G PPP GG
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 840 PXXXPPPPXXXGGGGGXPPPXXXXGGG 920
P PPP GG PPP G G
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAG 774
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.017
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 930 PPPPPPXXXXXGXAPPPPPP 871
PPPPPP PPPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 34.3 bits (75), Expect = 0.030
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 930 PPPPPPXXXXXGXAPPPPPP 871
PPPPPP PPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 930 PPPPPPXXXXXGXAPPPPPP 871
PPPPPP + PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 29.5 bits (63), Expect = 0.85
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPP 913
PPPP PPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPP 913
PPPP PPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPPXXXGGGG 850
PPPP + PP PPPPPP G
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Score = 30.3 bits (65), Expect = 0.49
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 972 AXPPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPPXXXG 859
A PPPP PPP PP PPP G
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 964 PPPXXXXXKXXXPPPPPPXXXXGGGXPPPPP 872
PP PPPPPP G P PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPP 871
PPPP P PP APPPPPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGR----SAPPPPPP 366
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPPXXXGG 856
PPPP PPP + PP PP G
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 973 GXXPPPXXXXXKXXXPPPPPPXXXXGGGXPPPPP 872
G PPP PP PPP G P PP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPP-AIPGRSAPALPP 405
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = -1
Query: 957 PXXXXXKXXPPPPPPXXXXXGXAPPPP 877
P + PPPPPP PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPP 871
P PP PP PP APPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPP 871
PPPP PP PP AP P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
PPPP PPPP PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 965 PPPXXXXXXXXXPPPPPPXXXXGGXXPPPP 876
PPP PPPP G PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
PPPP PPPP PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
PPPP PPPP PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
PPPP PPPP PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
PPPP PPPP PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 965 PPPXXXXXXXXXPPPPPPXXXXGGXXPPPP 876
PPP PPPP G PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
PPPP PPPP PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 965 PPPXXXXXXXXXPPPPPPXXXXGGXXPPPP 876
PPP PPPP G PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 963 PPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PPP PPPP G PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 930 PPPPPPXXXXXGXAPPPP 877
PPPPPP AP PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 873 GGGGGXPPPXXXXGGGGGGXXXXXXXXXGGG 965
GGG G PPP GG GG G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHG 224
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 860 PXXXGGGGGGAXPXXXXXGGGGGGXXFXXXXXGGGG 967
P GGG GG GGG GG GG G
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 851 PPPPXXXGGGGGGAXPXXXXXGGGGGGXXFXXXXXGGGGXA 973
PPPP GG G G G G GG GG G A
Sbjct: 76 PPPPGAEGGPGAG---FGGFPGAGPGGARTFHFNMGGPGGA 113
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 972 AXPPPPXXXXXKXXPPPPPPXXXXXGXAPPPP 877
A P P K PPPPP PP P
Sbjct: 730 APPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = -1
Query: 966 PPPPXXXXXKXXPPPPPPXXXXXGXAPPPPP 874
PP P PPPPP + PP P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -1
Query: 972 AXPPPPXXXXXKXXPPPPPPXXXXXGXAPPPPPPXXXGGGG 850
A PPPP K PP P PP G G
Sbjct: 1881 APPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPG 1921
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,102,155
Number of Sequences: 5004
Number of extensions: 36217
Number of successful extensions: 614
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 567771870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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