Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M10
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 225 4e-59
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 225 4e-59
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 224 6e-59
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 224 6e-59
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 224 6e-59
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 224 6e-59
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 224 6e-59
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 224 6e-59
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 224 6e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 222 2e-58
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 219 3e-57
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 128 5e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 100 1e-21
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 94 1e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 83 2e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.067
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.067
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 1.4
Z68134-3|CAA92225.1| 97|Caenorhabditis elegans Hypothetical pr... 29 3.3
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 4.4
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 5.8
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 225 bits (549), Expect = 4e-59
Identities = 114/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTGIVLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 138 bits (335), Expect = 4e-33
Identities = 86/155 (55%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 225 bits (549), Expect = 4e-59
Identities = 114/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTGIVLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 137 bits (331), Expect = 1e-32
Identities = 84/155 (54%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 140 bits (338), Expect = 2e-33
Identities = 87/155 (56%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 140 bits (338), Expect = 2e-33
Identities = 87/155 (56%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 140 bits (338), Expect = 2e-33
Identities = 87/155 (56%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 140 bits (338), Expect = 2e-33
Identities = 87/155 (56%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 140 bits (338), Expect = 2e-33
Identities = 87/155 (56%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 144
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 145 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 189
Score = 101 bits (242), Expect = 7e-22
Identities = 69/137 (50%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Frame = +1
Query: 184 KAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGLVRR*RGTEQKRYP-DPQI 339
+AGFAGDDAPRAVFPSIVGRPRHQG +D G E + RG +YP + I
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK--RGILTLKYPIEHGI 62
Query: 340 PHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQPKXNREKMTQIMFETFNT 519
+ + H P P PK NREKMTQIMFETFNT
Sbjct: 63 VTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 520 PAMYVAIQAVLSLYASG 570
PAMYVAIQAVLSLYASG
Sbjct: 117 PAMYVAIQAVLSLYASG 133
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 224 bits (548), Expect = 6e-59
Identities = 113/166 (68%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTG+VLDSG+
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 203
Score = 140 bits (338), Expect = 2e-33
Identities = 87/155 (56%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 VRR*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQ 465
+ RG +YP + I + + H P P
Sbjct: 61 SK--RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRVAPEEHPVLLTEAPLN 112
Query: 466 PKXNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
PK NREKMTQIMFETFNTPAMYVAIQAVLSLYASG
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 222 bits (543), Expect = 2e-58
Identities = 111/166 (66%), Positives = 122/166 (73%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 424
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 425 PEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGE 604
PEEHPVLLTEAPLNP+ + + + P + RTTGIVLD+G+
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGD 157
Query: 605 GVSHTVXIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
GV+HTV IYEGYALP AGRDL DY MKIL ERG +FTT
Sbjct: 158 GVTHTVPIYEGYALPHAIQRLDL-AGRDLTDYMMKILTERGYTFTT 202
Score = 131 bits (316), Expect = 7e-31
Identities = 83/153 (54%), Positives = 91/153 (59%), Gaps = 8/153 (5%)
Frame = +1
Query: 136 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGLVR 294
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E +
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 295 R*RGTEQKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQPK 471
RG +YP + I + + H P P PK
Sbjct: 62 --RGILTLKYPIEHGIVTNWDDMEKIWHH------TFYNELRIAPEEHPVLLTEAPLNPK 113
Query: 472 XNREKMTQIMFETFNTPAMYVAIQAVLSLYASG 570
NREKMTQIMFETFNTPAMYV IQAVLSLYASG
Sbjct: 114 SNREKMTQIMFETFNTPAMYVNIQAVLSLYASG 146
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 219 bits (534), Expect = 3e-57
Identities = 110/160 (68%), Positives = 118/160 (73%)
Frame = +2
Query: 263 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 442
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 443 LLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGEGVSHTV 622
LLTEAPLNP+ + + + P + RTTG+VLDSG+GV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 623 XIYEGYALPPRHPGSGTWAGRDLXDYXMKILXERG*SFTT 742
IYEGYALP AGRDL DY MKIL ERG SFTT
Sbjct: 121 PIYEGYALPHAILRLDL-AGRDLTDYLMKILTERGYSFTT 159
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 128 bits (309), Expect = 5e-30
Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRV 421
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 422 APEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSG 601
PEEHPVLLT+APLNP R + P + RTTG+VLDSG
Sbjct: 101 FPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSG 160
Query: 602 EGVSHTVXIYEGYALPPRHP-GSGTWAGRDLXDYXMKILXERG*SF 736
+GV+H V I +G+A+ +H AGRD+ +Y +L G F
Sbjct: 161 DGVTHAVPIVKGFAM--KHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Score = 74.9 bits (176), Expect = 7e-14
Identities = 53/146 (36%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Frame = +1
Query: 154 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ-----GRDGRYGTEGLVRR*RGTEQK 318
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ G DG RG
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 319 RYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACR--PRGTPRPAH*GSPQPKXNREKMT 492
YP + H N E + Y+ + P P P NRE+
Sbjct: 71 EYP---MEHGIVNN---WSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 493 QIMFETFNTPAMYVAIQAVLSLYASG 570
+I FETFN PA+Y+ +QAVLSLYA+G
Sbjct: 125 EIFFETFNVPALYIQMQAVLSLYATG 150
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 100 bits (240), Expect = 1e-21
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Frame = +2
Query: 281 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 457
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 458 PLNPRXT-ERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVRTTGIVLDSGEGVSHTVXIYE 634
PLNP E+ ++ + + + + TG+V+DSG+GV+H +YE
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGL-LTGVVVDSGDGVTHICPVYE 171
Query: 635 GYALPPRHPGSGTWAGRDLXDYXMKILXERG*SF 736
G+AL AGRD+ Y +K+L +RG +F
Sbjct: 172 GFALHHLTRRLDI-AGRDITKYLIKLLLQRGYNF 204
Score = 67.3 bits (157), Expect = 1e-11
Identities = 52/147 (35%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Frame = +1
Query: 154 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGRDGRYGTEGLV-----RR*RGTE 312
+VVDNG+G K G+AG + P +FPS+VGRP R R G + L+ + R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 313 QKRYP-DPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRPAH*GSPQPKXNREKM 489
YP D I + + H + C+ T P + P NREKM
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLN-----PNSNREKM 123
Query: 490 TQIMFETFNTPAMYVAIQAVLSLYASG 570
Q+MFE + ++YVA+QAVL+LYA G
Sbjct: 124 FQVMFEQYGFNSIYVAVQAVLTLYAQG 150
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 388
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 388
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 388
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +2
Query: 245 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 379
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Frame = +2
Query: 260 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 436
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 437 PVLLTEAPLN-PRXTERR*PRSCSKH-------STRPPCTSPSKPCSRCTRPVRTTGIVL 592
LLTE PLN P E + + + SR TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 593 DSGEGVSHTVXIYEGYALPP--RHPGSGTWAGRDLXDYXMKILXER 724
DSG+GV+H + + +GY + +H AGRD+ + +L +R
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHI---PIAGRDITYFIQSLLRDR 218
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 475 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 567
NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 130 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 237
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/101 (28%), Positives = 49/101 (48%)
Frame = +2
Query: 344 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPRXTERR*PRSCSKHSTRP 523
++ G++ +W+ EKI H++ N L P EHPVL +E+ N R + + P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 524 PCTSPSKPCSRCTRPVRTTGIVLDSGEGVSHTVXIYEGYAL 646
C RT G+++DSG + V +++GYA+
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAV 194
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 469 KXNREKMTQIMFETFNTPAMYVAIQAVLSLYASGPYH 579
+ REK+T+IMFE F PA Y++ VLS +A G H
Sbjct: 136 RARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH 172
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 139 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 237
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 278 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 403
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 278 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 403
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 139 EEVAALVVDNGS-GMCKAGFAGDDAPRAV--FPSIVGRPRHQGRDGRYGTEG 285
++++ L D G C AG G PR P I G P G GR+GT G
Sbjct: 146 DDISVLRHDPGRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>Z68134-3|CAA92225.1| 97|Caenorhabditis elegans Hypothetical
protein T27A8.4 protein.
Length = 97
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 420 SPPRNTPSCSLRLPSTQGQQREDDPD 497
SPP TP + P++Q Q EDD D
Sbjct: 63 SPPSGTPETEVETPASQPQDVEDDMD 88
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 196 AGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLVRR 297
AG PR P VG P QGRDG G G + R
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR 179
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 437 PVLLTEAPLNPRXTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV--RTTGIVLDSGEGV 610
P+ T APL P R R ++ T P T+ +P + RP RT +
Sbjct: 326 PLATTRAPLPPSPPPRTSKRPVTQAPTTPRATTTRRPTTTTPRPTPRRTRRPKTTTAAPT 385
Query: 611 SHTVXIYEGY 640
+ T + +GY
Sbjct: 386 TTTEEVTQGY 395
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 576 PPVSCWTPAKVSPTPXPSTRDTHFPH 653
PP CWTP+ +S T D+ PH
Sbjct: 439 PPAKCWTPSNLSGLDLRQT-DSKLPH 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,529,551
Number of Sequences: 27780
Number of extensions: 465408
Number of successful extensions: 1906
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -