Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M09
(962 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 4e-04
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 9e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.005
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.009
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 32 0.016
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.079
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.10
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.32
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.74
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 0.98
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 2.3
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 27 3.0
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.9
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 5.2
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 5.2
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 27 5.2
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.9
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 553 PXPPP-PPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
P P P P PP P GG P PP P G PPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPP-PPPPPGVAGAGPPPPPP 780
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 562 PPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
PPPPPP P+ P P A G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
PPPPP P P PP P G PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPP-PAPIMGGPPPPPP 766
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXPXAXXXGXP--PPPPRRXP 675
PPPPPPP A G P PP P G P P+ P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 30.7 bits (66), Expect = 0.32
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 553 PXPPPPPPPXXPAXGGR 603
P PPPPPPP A G R
Sbjct: 775 PPPPPPPPPAVSAGGSR 791
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 458 GXGXXPPPPPPP 423
G G PPPPPPP
Sbjct: 772 GAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 463 GXGGXXXPPPPPPP 422
G G PPPPPPP
Sbjct: 769 GVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect(2) = 0.046
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 80 PPXPPXXNTPPPPXXPP 130
PP P PPPP PP
Sbjct: 752 PPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 6.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 550 PPXPPPPPP 576
PP PPPPPP
Sbjct: 775 PPPPPPPPP 783
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 210 PPXXKKGXGXPXPPPPQXXXXXGXXPAP 293
PP G P PPPP G P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 9.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 442 PPPPPPPXG 416
PPPPPPP G
Sbjct: 761 PPPPPPPPG 769
Score = 25.8 bits (54), Expect(2) = 0.046
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 209 PPXXXKGXGXTXPPPPPXXXXXG 277
PP G G PPPPP G
Sbjct: 766 PPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.9 bits (69), Expect(2) = 9e-04
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +1
Query: 553 PXPPPPPPPXXPAXGGRPSLXP-PXPXAXXXGXP---PPPP 663
P PPPPPPP P S P P G PPPP
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
Score = 26.2 bits (55), Expect(2) = 9e-04
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 550 PPXPPPPPP 576
PP PPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 553 PXPPPPPPP 579
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/57 (24%), Positives = 14/57 (24%)
Frame = +2
Query: 89 PPXXNTPPPPXXPPXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXKGXGXTXPPPPP 259
P N PPPP PP PP P PPP
Sbjct: 184 PSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPP 240
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXPXXRR 687
PPPPPPP A G P P PPPPPR P R
Sbjct: 337 PPPPPPPRSNAAGSIP-----LPPQGRSAPPPPPPRSAPSTGR 374
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
PPPPPP P+ G +P PP + PP PP P
Sbjct: 361 PPPPPPRSAPSTGRQP---PPLSSSRAVSNPPAPPPAIP 396
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
PP P PP P PSL P P + G P PP
Sbjct: 415 PPVPTPPSLPP-SAPPSLPPSAPPSLPMGAPAAPP 448
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 562 PPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPR 666
PPPPPP G+P + + PPPPPR
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP-PPPPPPR 344
Score = 29.1 bits (62), Expect = 0.98
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +1
Query: 550 PPXPPPPP--PPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
P PP PP P P G P+ PP P A PPP P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPA-APPLPPAAP--APPPAPAPAP 484
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 553 PXPPPPPPPXXPAXGGRPSLXPPXPXA 633
P PPP PPP P+ PP P A
Sbjct: 251 PAPPPIPPPSNGTVSSPPN-SPPRPIA 276
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 417 PXGGGGGGGXXXPPXPXXXXPPPPPRXA 500
P G PP PPPPPR A
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 213 PXXKKGXGXPXPPPPQXXXXXGXXPAP 293
P +G P PPPP+ G P P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRP---SLXPPXPXAXXXGXPPPPPRRXP 675
PP PP P PA P + PP P P PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GGG GG GG GG RG +GG GG
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 33.9 bits (74), Expect = 0.034
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 572 GGGGGXGGXXGGGGGGXKKXXXRGRXAGGG--GGXXVXWGGXG 450
GG GG GG GG GG + GR GG GG GG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 33.9 bits (74), Expect = 0.034
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXWGG 456
GG GGG G GG GG RG GG GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 32.7 bits (71), Expect = 0.079
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -1
Query: 575 GGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXWGGXG 450
GG GGG GG GGG GG RG G GG G G
Sbjct: 26 GGFGGGRGGARGGGRGGA-----RGGRGGRGGARGGRGGSSG 62
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -1
Query: 575 GGGGGGXGGXXGGGGG-GXKKXXXRGRXAGGGGGXXVXWGG 456
GG GG GG GG GG G + RG GG G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -1
Query: 665 RGGGGGXPXXXAXGXXXXXXXXXXXXGXXGGGGGGGXGGXXGGGGGGXKKXXXRGRXAGG 486
RGG GG G GGG GG GG G GG + G G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Query: 485 GGGXXV 468
GG V
Sbjct: 68 KGGAKV 73
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXWGG 456
GG GG GG G GG + RG G GG GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 0.98
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 572 GGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXWGGXG 450
GG GG G GG GG + GR GGG GG G
Sbjct: 9 GGRGGSRGGRGGFNGG-RGGFGGGRGGARGGGRGGARGGRG 48
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.009
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -1
Query: 674 GXRRGGGGGXPXXXAXGXXXXXXXXXXXXGXXGGGGGGGXGGXXGGGGGGXKKXXXRGRX 495
G G GG P G G GG GGG G G GG G G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 494 AGGGGGXXVXWGGXGXXPPP 435
G GGG GG G P
Sbjct: 252 GGFGGGPGGFGGGPGGHGGP 271
Score = 30.3 bits (65), Expect = 0.42
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 575 GGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXWGGXG 450
G GGG GG GGG GG GG GG GG G
Sbjct: 184 GHNGGGFGG-FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHG 224
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 31.9 bits (69), Expect(2) = 0.016
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 553 PXPPPPPPPXXPAXGGR 603
P PPPPPPP A GG+
Sbjct: 945 PPPPPPPPPLVSAAGGK 961
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXG 597
PP PPPPPP A G
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 25.4 bits (53), Expect(2) = 0.36
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXP 618
PPPPPPP + G + P
Sbjct: 946 PPPPPPPPLVSAAGGKFVSP 965
Score = 23.4 bits (48), Expect(2) = 0.36
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 553 PXPPPPPP 576
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 21.8 bits (44), Expect(2) = 0.016
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 550 PPXPPPPPPP 579
P PPPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 34.3 bits (75), Expect = 0.026
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGG 480
GGG GG GG G GG G + GR G GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = +1
Query: 550 PPXPP---PPPPPXXPAXGGRPSL-XPPXPXAXXXGXPPPPPR 666
PP PP PPPP P G PS PP P + P P R
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
PP P PP P P PP P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.56
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPP 660
P P PP P P + P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 83 PXPPXXNTPPPPXXPP 130
P PP + PPPP PP
Sbjct: 1707 PPPPPMSVPPPPSAPP 1722
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.7 bits (71), Expect = 0.079
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GG GG GG GG + RG GG G
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 578 GGGGG--GGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GG GG GG GG GG + G G GGG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 575 GGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GGG G GGG G + RG GG G
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 30.7 bits (66), Expect = 0.32
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXWGG 456
G G GG GG GG GG R GGG GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 575 GGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GG GG GG GG + G GG G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 29.5 bits (63), Expect = 0.74
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GG G GG GGG + G G GG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 572 GGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG GG G GG G RG GG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
PP P PPP PA P PP + PP PP+ P
Sbjct: 165 PPIPSSLPPPAQPAA---PVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 550 PPXP--PPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
PP P PPP P P PS PP P + P P + P
Sbjct: 144 PPRPSIPPPSPASAPPI---PSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 26.6 bits (56), Expect = 5.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 553 PXPPPPPPPXXPA 591
P PPPPPP PA
Sbjct: 3 PAPPPPPPAPAPA 15
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
PP P PP P + L PP PPP P P
Sbjct: 124 PPSAPAPPTP-------QSELRPPTSAPPRPSIPPPSPASAP 158
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRP----SLXPPXPXAXXXGXPPPPP 663
P PPP P P P SL PP A PP P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXP 627
PP PPPPPP P PS PP P
Sbjct: 5 PPGNPPPPPP--PPGFEPPSQPPPPP 28
Score = 29.5 bits (63), Expect = 0.74
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
P PPPPPPP G P PP PPPPP
Sbjct: 6 PGNPPPPPPP----PGFEPPSQPP---------PPPPP 30
Score = 25.8 bits (54), Expect(2) = 0.59
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 442 PPPPPPPXG 416
PPPPPPP G
Sbjct: 9 PPPPPPPPG 17
Score = 22.2 bits (45), Expect(2) = 0.59
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 454 GXXXPPPPPP 425
G PPPPPP
Sbjct: 7 GNPPPPPPPP 16
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.74
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Frame = +1
Query: 550 PPXPPPP---PPPXXPAXG----GRPSLXPPXPXAXXXGXPPPPPRRXP 675
PP P P PP PA G PS PP P P PPP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +1
Query: 550 PPXPPPP--PPPXXPAXG----GRPSLXPPXPXAXXXGXPPPP 660
PP PPP PP P+ G PS PP P G PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP-TPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 550 PPXP-PPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
PP P P PP + G PS PP P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
PP P P P P P+ PP P + PPP P
Sbjct: 1032 PPIPVPSTAPPVPI----PTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 550 PPXPPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPP 660
PP P P P P +PS+ P A G PP P
Sbjct: 1150 PPVPAPSGAPPVP----KPSVAAPPVPAPSSGIPPVP 1182
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXPXAXXXGXPPPPP 663
PP PPP P + PP P P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGGXKKXXXRG-RXAGGG--GGXXVXWGGXGXXP 441
GGGG GG G GG G R GGG GG +GG G P
Sbjct: 135 GGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGP 183
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 575 GGGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGG 477
GG G G GG G G GG + GG GG
Sbjct: 83 GGPGAGFGGFPGAGPGGARTFHFN---MGGPGG 112
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +1
Query: 550 PPXPPPP--PPPXXPAXGGRPSLXPPXPXAXXXGXPPPPPRRXP 675
P PP P P P P G P P P G PP P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 457 GGXXXPPPPPPPXGE 413
GG PPPPPPP +
Sbjct: 303 GGLPPPPPPPPPSND 317
Score = 26.2 bits (55), Expect = 6.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 550 PPXPPPPPP 576
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 553 PXPPPPPPP 579
P PPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 572 GGGGGXGGXXGGGGGGXKKXXXRGRXAGGGGGXXVXW 462
GG GG G GG G G R AGG G W
Sbjct: 128 GGRGGRYGSSGGRGAGDT-VVSRSSGAGGARGRRFGW 163
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 442 PPPPPPPXGEXXRK 401
PPPPPPP E +K
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 3.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 464 WGGXGXXPPPPPPP 423
W PPPPPPP
Sbjct: 363 WSNISYSPPPPPPP 376
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 559 PPPPPPPXXPAXGGRPSLXPPXP 627
PPPPP P P G + P P
Sbjct: 241 PPPPPRPSQPTSGESQNTNPRFP 263
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +1
Query: 565 PPPPPXXPAXGGRPSLXPPXPXAXXXGXPP-PPPRRXPXXRRA 690
P P P G S P P PP PPPR+ +R+
Sbjct: 1015 PRVKPLLPPRSGSSSSGVPAPNLTPVNVPPTPPPRKSSASQRS 1057
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 566 GGGXGGXXGGGGGGXKKXXXRGRXAGGGG 480
G GG G GG + RGR G GG
Sbjct: 433 GSSRGGYHGRNPGGPNRQRYRGRRDGRGG 461
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 578 GGGGGGGXGGXXGGGGGG 525
GG GG G GG G G GG
Sbjct: 226 GGLGGAGLGGLGGAGLGG 243
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 562 PPPPPPXXPAXGGRPSLXP 618
PPPPPP G PS P
Sbjct: 1882 PPPPPPMALPKAGPPSAAP 1900
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +1
Query: 565 PPPPPXXPAXGGRPSLXPPXPXAXXXGXPPP 657
PPPPP P++ P P PP
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPP 938
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,723,677
Number of Sequences: 5004
Number of extensions: 24787
Number of successful extensions: 692
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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