Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M08
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704...    32   0.70 
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    29   3.7  
10_08_1061 - 22622805-22622961,22623262-22623441,22623482-226234...    29   4.9  
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846...    29   6.5  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
12_01_0023 - 173691-174119                                             28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>12_02_0118 -
           13869237-13869307,13869375-13869465,13870321-13870440,
           13870668-13870795,13871159-13871270,13871719-13871817,
           13871918-13871992,13872099-13872320,13873177-13874034
          Length = 591

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 597 GL*RYQAVXPPGSSLVRSPVXEPWPLTGIPG--PPFSPSGKRGR 722
           G  ++    PP      +P  +P P  G+PG  PPF P G +G+
Sbjct: 240 GAPQWPGTQPPPFGAQAAPSSQPPPFMGVPGNAPPFRPPGWQGQ 283


>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 21/61 (34%), Positives = 25/61 (40%)
 Frame = +2

Query: 665 LAAYRNTWSAFLPFGEAWAPFSYXTLVXISXPVLGXSXPSWAVFPETPPFHPEPLRPYPV 844
           L A R T +A L F  A A   +      + P    + PS    P  PP  P PL P P 
Sbjct: 42  LRALRATGAALLQFASAEADHPHPHHHVSAAPPPPQTPPSPPPPPPPPPPPPPPLSPTPT 101

Query: 845 T 847
           T
Sbjct: 102 T 102


>10_08_1061 -
           22622805-22622961,22623262-22623441,22623482-22623489,
           22623682-22623845,22623969-22624134
          Length = 224

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 797 PETPPFHPEPLRPYP 841
           P  PPF P PLRP+P
Sbjct: 60  PGVPPFSPAPLRPHP 74


>05_04_0443 -
           21283680-21283940,21284044-21284118,21284620-21284649,
           21286744-21287247
          Length = 289

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 778 SKLGCVPRNPPXSPRTAAPLSGNXPSXXPP 867
           S    +P  PP  PR + P+S + P   PP
Sbjct: 31  SAAAVLPARPPSPPRASIPVSSSPPLLPPP 60


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 346 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 501
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>12_01_0023 - 173691-174119
          Length = 142

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 713 LPRRGERRTRYSGKRPGFGNRRAHEGASRGXNGLVSL 603
           LPRRG +   + G  P  G     EGA  G +   SL
Sbjct: 100 LPRRGSQDAEHGGNLPALGLEGRREGARGGRHARGSL 136


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 295 NESAN---ARGEAVCVLGALPLPRSLTRCAR 378
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,710,620
Number of Sequences: 37544
Number of extensions: 525352
Number of successful extensions: 1731
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)