BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M07
(892 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 25 4.1
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 9.4
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 24.6 bits (51), Expect = 4.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 132 WGGGXXGXGGXKKRGXXGAXLTFXXGFXRGXKIXXXXXRGGG 257
+GGG G GG + G G G RG + GGG
Sbjct: 57 YGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.4 bits (48), Expect = 9.4
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 192 GXPXAXPVFSXPXXXXIXPPNFKKNPIXXFPNATRG 85
G P + V P + PP K NP P RG
Sbjct: 87 GLPGSKGVKGDPGLSMVGPPGPKGNPGLRGPKGERG 122
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,006
Number of Sequences: 2352
Number of extensions: 5513
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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