Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M07
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 34 0.80
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 34 0.80
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 34 0.80
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 34 0.80
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 34 0.80
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 32 2.4
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 31 5.6
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 5.6
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 31 5.6
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 5.6
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 5.6
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 5.6
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 31 5.6
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 33.9 bits (74), Expect = 0.80
Identities = 25/85 (29%), Positives = 29/85 (34%)
Frame = +1
Query: 637 PPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAPXT 816
PP LP G PPP + P + PPP GG P P AP
Sbjct: 220 PPSLPAGPPGVKRPPP--PLMNGLPPRPPLPESLPPPPPGGL----PLPPMPPTGPAPSG 273
Query: 817 PSXPXXIPSAXXRPXLXPXXPSSSP 891
P P +P P + P P P
Sbjct: 274 PPGPPQLP--PPAPGVHPPAPVVHP 296
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 25/85 (29%), Positives = 29/85 (34%)
Frame = +1
Query: 637 PPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAPXT 816
PP LP G PPP + P + PPP GG P P AP
Sbjct: 220 PPSLPAGPPGVKRPPP--PLMNGLPPRPPLPESLPPPPPGGL----PLPPMPPTGPAPSG 273
Query: 817 PSXPXXIPSAXXRPXLXPXXPSSSP 891
P P +P P + P P P
Sbjct: 274 PPGPPQLP--PPAPGVHPPAPVVHP 296
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 33.9 bits (74), Expect = 0.80
Identities = 25/85 (29%), Positives = 29/85 (34%)
Frame = +1
Query: 637 PPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAPXT 816
PP LP G PPP + P + PPP GG P P AP
Sbjct: 220 PPSLPAGPPGVKRPPP--PLMNGLPPRPPLPESLPPPPPGGL----PLPPMPPTGPAPSG 273
Query: 817 PSXPXXIPSAXXRPXLXPXXPSSSP 891
P P +P P + P P P
Sbjct: 274 PPGPPQLP--PPAPGVHPPAPVVHP 296
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 33.9 bits (74), Expect = 0.80
Identities = 25/85 (29%), Positives = 29/85 (34%)
Frame = +1
Query: 637 PPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAPXT 816
PP LP G PPP + P + PPP GG P P AP
Sbjct: 220 PPSLPAGPPGVKRPPP--PLMNGLPPRPPLPESLPPPPPGGL----PLPPMPPTGPAPSG 273
Query: 817 PSXPXXIPSAXXRPXLXPXXPSSSP 891
P P +P P + P P P
Sbjct: 274 PPGPPQLP--PPAPGVHPPAPVVHP 296
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 33.9 bits (74), Expect = 0.80
Identities = 25/85 (29%), Positives = 29/85 (34%)
Frame = +1
Query: 637 PPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAPXT 816
PP LP G PPP + P + PPP GG P P AP
Sbjct: 220 PPSLPAGPPGVKRPPP--PLMNGLPPRPPLPESLPPPPPGGL----PLPPMPPTGPAPSG 273
Query: 817 PSXPXXIPSAXXRPXLXPXXPSSSP 891
P P +P P + P P P
Sbjct: 274 PPGPPQLP--PPAPGVHPPAPVVHP 296
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/87 (27%), Positives = 28/87 (32%)
Frame = +1
Query: 619 PXXXQPPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPX 798
P PPP LP G P P + P P P + P P
Sbjct: 297 PASIPPPPPLPSGL-GSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPL 355
Query: 799 PXAPXTPSXPXXIPSAXXRPXLXPXXP 879
P +P P+ P P A P L P P
Sbjct: 356 PNSPAPPN-PGGPPPAPPPPGLAPPPP 381
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Frame = +1
Query: 619 PXXXQPPPXLPXXXXGXXXPPPXNXXLXXS-XPXXXXSQXXXPPPXGGXSXXRPFFXXHP 795
P PPP LP PPP L S P PPP G P
Sbjct: 329 PPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGL 388
Query: 796 XPXAPXTPSXPXXIPSAXXRP 858
+ P P PS +P
Sbjct: 389 GSSSSQCPRKPAIEPSCPMKP 409
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 793 PXPXAPXTPSXPXXIPSAXXRPXLXPXXPSSSP 891
P P P P P +P+A +P P P+S+P
Sbjct: 2037 PEPPPPPPPPPPPPLPAAPPQPASTPAIPASAP 2069
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +1
Query: 634 PPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXG----GXSXXRPFFXXHPXP 801
PPP P PPP N P S PPP G P P P
Sbjct: 322 PPPPPPSRPSVEVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAP--PPPPPP 379
Query: 802 XAPXTPSXPXXIPS 843
P P P +PS
Sbjct: 380 PPPPGPPPPPGLPS 393
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = +1
Query: 631 QPPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAP 810
Q PP P G PPP P PPP + P P P P
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPP----PPPPSRP 330
Query: 811 XTPSXPXXIPSAXXRPXLXPXXPSSSP 891
P P P P PSS+P
Sbjct: 331 SVEVPPP--PPNRMYPPPPPALPSSAP 355
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 793 PXPXAPXTPSXPXXIPSAXXRPXLXPXXPSSSP 891
P P P P P +P+A +P P P+S+P
Sbjct: 1123 PEPPPPPPPPPPPPLPAAPPQPASTPAIPASAP 1155
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +1
Query: 634 PPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXG----GXSXXRPFFXXHPXP 801
PPP P PPP N P S PPP G P P P
Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAP--PPPPPP 379
Query: 802 XAPXTPSXPXXIPS 843
P P P +PS
Sbjct: 380 PPPPGPPPPPGLPS 393
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = +1
Query: 631 QPPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAP 810
Q PP P G PPP P PPP + P P P P
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPP----PPPPSRP 330
Query: 811 XTPSXPXXIPSAXXRPXLXPXXPSSSP 891
P P P P PSS+P
Sbjct: 331 SVAVPPP--PPNRMYPPPPPALPSSAP 355
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +1
Query: 634 PPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXG----GXSXXRPFFXXHPXP 801
PPP P PPP N P S PPP G P P P
Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAP--PPPPPP 379
Query: 802 XAPXTPSXPXXIPS 843
P P P +PS
Sbjct: 380 PPPPGPPPPPGLPS 393
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +1
Query: 634 PPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXG----GXSXXRPFFXXHPXP 801
PPP P PPP N P S PPP G P P P
Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAP--PPPPPP 379
Query: 802 XAPXTPSXPXXIPS 843
P P P +PS
Sbjct: 380 PPPPGPPPPPGLPS 393
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = +1
Query: 631 QPPPXLPXXXXGXXXPPPXNXXLXXSXPXXXXSQXXXPPPXGGXSXXRPFFXXHPXPXAP 810
Q PP P G PPP P PPP + P P P P
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPP----PPPPSRP 330
Query: 811 XTPSXPXXIPSAXXRPXLXPXXPSSSP 891
P P P P PSS+P
Sbjct: 331 SVAVPPP--PPNRMYPPPPPALPSSAP 355
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 793 PXPXAPXTPSXPXXIPSAXXRPXLXPXXPSSSP 891
P P P P P +P+A +P P P+S+P
Sbjct: 887 PEPPPPPPPPPPPPLPAAPPQPASTPAIPASAP 919
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,305,869
Number of Sequences: 237096
Number of extensions: 1122394
Number of successful extensions: 4431
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3822
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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