Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M06
         (896 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   4.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 199 PFRWCISRKGHRPRES 246
           PF+W   +K  R RES
Sbjct: 323 PFKWLFKKKKRRNRES 338


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 407 GHAVGDIPGVRFKVVKVANVSLLALYKEK-KERPRS*VYIVISDLLSGSALFISSXNVKS 583
           G AVGD+PG+R +V+   N+       E  ++   + VY+ ++    GS   + S +V  
Sbjct: 62  GTAVGDVPGLR-QVLANGNLVFPPFRAEDYRQEVHAQVYVCLAKNSVGS---VHSRDVNV 117

Query: 584 *YIINIVY 607
             ++N  Y
Sbjct: 118 RAVVNQYY 125


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 82  LDSTTPIGYGWEKQILRN 29
           +D T  +  GWE Q+L N
Sbjct: 266 VDETAGVYSGWEGQVLEN 283


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 622 PXXPPPPXPPP 654
           P  PP P PPP
Sbjct: 95  PTTPPTPSPPP 105



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 583 LVHNKYCVQPHXPPXXPPPP 642
           ++  K  V P  PP   PPP
Sbjct: 86  ILAEKVSVSPTTPPTPSPPP 105


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 592 NKYCVQPHXPPXXPPPPXPP 651
           N Y   P  PP   PP  PP
Sbjct: 172 NNYPPLPQVPPLPLPPIFPP 191


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -1

Query: 521 CTPMILVAPFSLCRERGET 465
           C P + V P   C E G T
Sbjct: 163 CDPAVCVLPDCFCSEDGTT 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,740
Number of Sequences: 336
Number of extensions: 4190
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)