Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M03
         (1137 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786...    31   2.2  
05_07_0359 - 29539294-29540832,29542366-29542518                       29   6.8  

>09_02_0362 +
           7860088-7860197,7861606-7861636,7861738-7861801,
           7861922-7862052,7863575-7863784,7863891-7863956,
           7864868-7865075,7866270-7866325,7866406-7867128,
           7868246-7868299,7868667-7868695,7869501-7869585,
           7870032-7870202,7870246-7870827
          Length = 839

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 467 NVERKNSAAQRQKQKPARVQYIAFWVGVSTGCSRAQPGFI 586
           N +++    Q+Q+Q+    +Y+  W G  +G  + QP FI
Sbjct: 508 NAQQQQQQQQQQQQQQPPPKYVKIWEGTLSGQRQGQPVFI 547


>05_07_0359 - 29539294-29540832,29542366-29542518
          Length = 563

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +3

Query: 177 KGPGGAAKNQEEXPXLXGXEGXPFKPRPRVTALILPKGRPNLAGRAXPKK 326
           +GPG   KN    P   G +  P +PR   TA  L  G     GR  P+K
Sbjct: 213 RGPGRPRKNAAATPLRLGAKRGPGRPRKNATATPLSLGVKRGPGR--PRK 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,956,165
Number of Sequences: 37544
Number of extensions: 436172
Number of successful extensions: 1155
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)