Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L24
         (926 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   7.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 859 GRGXGRXXXGGGGGG 815
           GRG GR    G GGG
Sbjct: 94  GRGGGRDGDRGDGGG 108


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
 Frame = +2

Query: 812 PAPAPPPPXXXXXPXPX-PLXPTXAXPPPXPATHXPP 919
           P PA PP        P  P  P    PP  P T   P
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 872  PTXAXPPPXPATHXPPXP 925
            PT   PP  P +  PP P
Sbjct: 1371 PTEWHPPIPPTSEKPPLP 1388


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +2

Query: 758 PPAXGGPPXPPXXXXXXPPAPAPPP 832
           PPA      P        PA APPP
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAPPP 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,884
Number of Sequences: 336
Number of extensions: 3299
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)