Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L22
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          35   9e-04
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      35   9e-04
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          29   0.077
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      29   0.077
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    28   0.13 
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    24   2.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 35.1 bits (77), Expect = 9e-04
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = -3

Query: 487 PSRGMVPXGTYDGFPFQXXVFVYPYEPTPKXXXPXKF--XVXXNKPXGYPFXXPXFPQXF 314
           P R ++P G  +G PFQ  ++V P            +       +  G+P   P +   +
Sbjct: 601 PGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKPLYDFNY 660

Query: 313 KQPXMFXKKVLVY 275
           + P M  K +L+Y
Sbjct: 661 EGPNMLFKDILIY 673


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 35.1 bits (77), Expect = 9e-04
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = -3

Query: 487 PSRGMVPXGTYDGFPFQXXVFVYPYEPTPKXXXPXKF--XVXXNKPXGYPFXXPXFPQXF 314
           P R ++P G  +G PFQ  ++V P            +       +  G+P   P +   +
Sbjct: 601 PGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKPLYDFNY 660

Query: 313 KQPXMFXKKVLVY 275
           + P M  K +L+Y
Sbjct: 661 EGPNMLFKDILIY 673


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 0.077
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = -3

Query: 487 PSRGMVPXGTYDGFPFQXXVFVYPYEPTPKXXXPXKF---XVXXNKPXGYPFXXPXFPQX 317
           P R ++P G  +G P+   V V P++ +             +   +  G+P   P  P  
Sbjct: 599 PERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLL 658

Query: 316 FKQPXMFXKKVLVY 275
                +  K+VLV+
Sbjct: 659 LVLSNIHVKEVLVH 672


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 0.077
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = -3

Query: 487 PSRGMVPXGTYDGFPFQXXVFVYPYEPTPKXXXPXKF---XVXXNKPXGYPFXXPXFPQX 317
           P R ++P G  +G P+   V V P++ +             +   +  G+P   P  P  
Sbjct: 599 PERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLL 658

Query: 316 FKQPXMFXKKVLVY 275
                +  K+VLV+
Sbjct: 659 LVLSNIHVKEVLVH 672


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 361  KPXGYPFXXPXFPQXFKQPXMFXKKVLVYXEG 266
            KP G+P   P        P +F K VLV+ +G
Sbjct: 971  KPLGFPLDRPLSLGALSVPNIFVKDVLVFHQG 1002



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 487 PSRGMVPXGTYDGFPFQXXVFVYPYEP 407
           P+R  +P G   GFP Q  V +    P
Sbjct: 622 PARLSLPKGQPQGFPLQFLVVISSSNP 648


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 616 PETGQGFNLFAPNXSKPR 669
           P++G+GF+LFA     PR
Sbjct: 176 PKSGKGFSLFARFLKNPR 193


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 487 PSRGMVPXGTYDGFPFQXXVFVYPYE 410
           P   ++P G  +GF  +  V V  Y+
Sbjct: 584 PQHMLIPKGNKEGFAMELFVMVSDYK 609


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,365
Number of Sequences: 438
Number of extensions: 3240
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)