Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_L21
(966 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.033
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.70
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.70
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.70
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 25 3.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 5.0
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 5.0
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 8.7
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 8.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.7
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 315 FFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
F PP GG PPP F G PP G P PP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 306 PPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
PP GG PPP G PP G P P PP
Sbjct: 87 PPMFAGGIPPPPPMM-GGIPPPPPMFGAPPPPPP 119
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 363 GGXXXTXGXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
GG G P P PP G PPP PPP G P P PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPP-----------PPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +2
Query: 206 GGXGXGXPLGGGXXXXPXKKKXXGGGXPPXXKGGXKXXFLGKXGXPXVFXXPPXXXXKXX 385
GG P+ GG P GG PP GG G P PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 386 XPP 394
PP
Sbjct: 761 PPP 763
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = -1
Query: 360 GXXXTXGXPXXPKXXFFXPPFXXGGXPPPXXF----FFXGXXXXPPPRGXPXPXPP 205
G G P P PP G PPP G PPP G P PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 363 GGXXXTXGXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
GG G P P PP G PPP PPP G P P PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPP-----------PPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +2
Query: 206 GGXGXGXPLGGGXXXXPXKKKXXGGGXPPXXKGGXKXXFLGKXGXPXVFXXPPXXXXKXX 385
GG P+ GG P GG PP GG G P PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 386 XPP 394
PP
Sbjct: 761 PPP 763
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = -1
Query: 360 GXXXTXGXPXXPKXXFFXPPFXXGGXPPPXXF----FFXGXXXXPPPRGXPXPXPP 205
G G P P PP G PPP G PPP G P PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 363 GGXXXTXGXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
GG G P P PP G PPP PPP G P P PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPP-----------PPPGGCPPPPPP 357
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +2
Query: 206 GGXGXGXPLGGGXXXXPXKKKXXGGGXPPXXKGGXKXXFLGKXGXPXVFXXPPXXXXKXX 385
GG P+ GG P GG PP GG G P PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 386 XPP 394
PP
Sbjct: 344 PPP 346
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = -1
Query: 360 GXXXTXGXPXXPKXXFFXPPFXXGGXPPPXXF----FFXGXXXXPPPRGXPXPXPP 205
G G P P PP G PPP G PPP G P PP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -1
Query: 360 GXXXTXGXPXXPKXXFFXPPFXXG-GXPPPXXFFFXGXXXXPPPRGXPXPXP 208
G G P P F PP G PPP + G PPP P P
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -1
Query: 360 GXXXTXGXPXXPKXXFFXPPFXXG-GXPPPXXFFFXGXXXXPPPRGXPXPXP 208
G G P P F PP G PPP + G PPP P P
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Frame = -1
Query: 510 GGGPKKKXXFPXGGGGX-FXGGXKNXXXXXXXXXXKXXXXGGXXXFXXXXGGXXXTXGXP 334
GGGP + P GG F GG + G F GG
Sbjct: 1487 GGGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMRGG--FPQRGGGPGMGPSQY 1544
Query: 333 XXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRG 226
PP GG PPP PPPRG
Sbjct: 1545 YHDSPQNRGPPM--GGLPPPHGGMNGWRGGPPPPRG 1578
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
Frame = -1
Query: 240 PPPR-GXPXPXPP 205
PPPR G P P PP
Sbjct: 1592 PPPRLGMPPPGPP 1604
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 342 GXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G P P PP G PPP PPPR P PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPP 276
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 342 GXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G P P+ PP G PPP G PP G P P PP
Sbjct: 262 GSPPPPRTGSPPPP-PTGSPPPPPA----GGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 342 GXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G P P PP G PPP PPPR P PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPP 297
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 342 GXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G P P+ PP G PPP G PP G P P PP
Sbjct: 283 GSPPPPRTGSPPPP-PTGSPPPPPA----GGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 342 GXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G P P PP G PPP PPPR P PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPP 282
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 342 GXPXXPKXXFFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G P P+ PP G PPP G PP G P P PP
Sbjct: 268 GSPPPPRTGSPPPP-PTGSPPPPPA----GGSPPPPRAGSPPPPPP 308
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 357 PPXKXXKXXXXPPXXXXFFXPXPGGGGXFXXPXKXPPPPP 476
PP + PP + GGG P PPPPP
Sbjct: 29 PPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPP 68
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 357 PPXKXXKXXXXPPXXXXFFXPXPGGGGXFXXPXKXPPPPP 476
PP + PP + GGG P PPPPP
Sbjct: 29 PPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPP 68
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -1
Query: 363 GGXXXTXGXPXXPKXX-FFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G G P P + PP G PPP G PP G P P PP
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHG-----PPGGPPMPGPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -1
Query: 363 GGXXXTXGXPXXPKXX-FFXPPFXXGGXPPPXXFFFXGXXXXPPPRGXPXPXPP 205
G G P P + PP G PPP G PP G P P PP
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHG-----PPGGPPMPGPP 205
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 408 FFXPXPGGGGXFXXPXKXPPPPPXG 482
F P GGGG P PPPPP G
Sbjct: 17 FLLPSGGGGGCGCAPP--PPPPPCG 39
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 408 FFXPXPGGGGXFXXPXKXPPPPPXG 482
F P GGGG P PPPPP G
Sbjct: 17 FLLPSGGGGGCGCAPP--PPPPPCG 39
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 408 FFXPXPGGGGXFXXPXKXPPPPPXG 482
F P GGGG P PPPPP G
Sbjct: 17 FLLPSGGGGGCGCAPP--PPPPPCG 39
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 417 PXPGGGGXFXXPXKXPPPPP 476
P PGG G F P PPP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 417 PXPGGGGXFXXPXKXPPPPP 476
P PGG G F P PPP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,639,772
Number of Sequences: 27780
Number of extensions: 127286
Number of successful extensions: 590
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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