Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L18
         (939 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    33   1.1  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                33   1.1  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    33   1.5  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    33   1.5  
AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    33   1.5  
Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4, ...    31   6.0  

>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = +1

Query: 790 PPPXGFXF*XFPXPXGXPXSPXFPPH--XKKXXPXPPXXXAXXRLFGXPP 933
           PPP GF     P P   P SP FPPH       P PP   A       PP
Sbjct: 464 PPPIGFGSPGTPPP---PSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPP 510


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = +1

Query: 790 PPPXGFXF*XFPXPXGXPXSPXFPPH--XKKXXPXPPXXXAXXRLFGXPP 933
           PPP GF     P P   P SP FPPH       P PP   A       PP
Sbjct: 335 PPPIGFGSPGTPPP---PSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPP 381


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = +1

Query: 790 PPPXGFXF*XFPXPXGXPXSPXFPPHXKKXXPXPP 894
           PPP GF     P P   P  P FPPH     P PP
Sbjct: 336 PPPVGFGSPGTPPP---PSPPSFPPHPDFAAPPPP 367


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = +1

Query: 790 PPPXGFXF*XFPXPXGXPXSPXFPPHXKKXXPXPP 894
           PPP GF     P P   P  P FPPH     P PP
Sbjct: 336 PPPVGFGSPGTPPP---PSPPSFPPHPDFAAPPPP 367


>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = +1

Query: 790 PPPXGFXF*XFPXPXGXPXSPXFPPHXKKXXPXPP 894
           PPP GF     P P   P  P FPPH     P PP
Sbjct: 8   PPPVGFGSPGTPPP---PSPPSFPPHPDFAAPPPP 39


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = +1

Query: 790 PPPXGFXF*XFPXPXGXPXSPXFPPHXKKXXPXPP 894
           PPP GF     P P   P  P FPPH     P PP
Sbjct: 336 PPPVGFGSPGTPPP---PSPPSFPPHPDFAAPPPP 367


>Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 195

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -2

Query: 290 GPRSPGPL*RCHHGCSCPFFQFS*RSSTWAREQRWSFSKPAPERRRRI 147
           GPR+PGP     HG   P      R  +W RE+     KP   +RR +
Sbjct: 16  GPRAPGPSLLVRHGSGLPPSALK-RGPSWTRERTLVAVKPDGVQRRLV 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,784,712
Number of Sequences: 237096
Number of extensions: 1773806
Number of successful extensions: 2950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2915
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)