Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L16
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0074 - 11461300-11461681,11461744-11462009                       31   0.95 
07_01_0311 - 2211824-2212410,2213275-2213290                           30   2.2  
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997...    30   2.2  
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638...    28   8.8  
06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554     28   8.8  

>06_02_0074 - 11461300-11461681,11461744-11462009
          Length = 215

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 278 WERAT-KDFLVKVVTTGEFFNDDRGKLTGQAYGTRVLGPGGDSTSYGGRLDWANE 439
           W R T  +   KV T G+   D RG+  G+A G    G GGD    G    WA E
Sbjct: 133 WGRRTVTEKAYKVATAGDTEGDKRGEEGGEAGGGDADGAGGDGGGKGE--GWATE 185


>07_01_0311 - 2211824-2212410,2213275-2213290
          Length = 200

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 196 GQSDTLAIFTTLSLGTGEMGGGKVFGTLGESDQG 297
           G + T  I  + + GT  MGG  VFGT+G +  G
Sbjct: 95  GTAGTAGIGGSATFGTAGMGGNAVFGTIGTAGIG 128


>03_02_0631 +
           9969841-9969868,9969965-9970082,9970186-9970828,
           9971146-9971935,9972002-9972051,9972618-9972704
          Length = 571

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -3

Query: 366 ACPVSLPRSSLKNSPVVTTFTKKSLVALSQSPEDLPSP 253
           AC  S+ R SLK SPVV+  +++ L   S SP D  SP
Sbjct: 414 ACRSSIDRLSLKGSPVVSGLSQRQL--SSDSPLDKLSP 449


>12_02_1076 -
           25862671-25863159,25863290-25863451,25863614-25863838,
           25863939-25864037,25864584-25864992,25865094-25865221,
           25865955-25866329
          Length = 628

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 238 GTGEMGGGKVFGTLGESDQGLFGK-GGYNRG 327
           G G+ G G+  G  G S  G FG  GG N G
Sbjct: 590 GFGDSGSGRFGGGFGNSGSGSFGNFGGNNSG 620


>06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554
          Length = 449

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 472 KLVAALGSKHQLPACGILVXILPCHLAEWSL 564
           +LV AL  K++LP   +L  I P +L+ W L
Sbjct: 71  ELVQALSDKYRLPVRFLLSSIPPTYLSAWEL 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,253,840
Number of Sequences: 37544
Number of extensions: 474009
Number of successful extensions: 1452
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)