Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L10
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.57 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.2  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +2

Query: 692 PPF*KIXXPPPQKXPPXXKXXXXKNXXXPPXPPPPPXXXLS 814
           PP  K   P P++  P        +   PP P PPP   L+
Sbjct: 72  PP--KREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLT 110


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect(2) = 1.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 781 PPPPPPXXXXF 813
           PPPPPP    F
Sbjct: 732 PPPPPPRVESF 742



 Score = 20.6 bits (41), Expect(2) = 1.1
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 775 PXPPPPP 795
           P PPPPP
Sbjct: 731 PPPPPPP 737


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 301 TLYLILFVFL*FRTVD*SFSLLEYVD 224
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 301 TLYLILFVFL*FRTVD*SFSLLEYVD 224
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 37   DLIRLIDSVEPTSRFENVFYKNSIYRHHL 123
            D +   DS+   +  +  F     YRHHL
Sbjct: 1045 DAVMTSDSIMKCAFCDTPFISKGAYRHHL 1073


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 151 SGSTAHNHYANDGDKYYFC 95
           SGS + + + +D  KYY C
Sbjct: 166 SGSFSRHAHPDDCRKYYIC 184


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 151 SGSTAHNHYANDGDKYYFC 95
           SGS + + + +D  KYY C
Sbjct: 166 SGSFSRHAHPDDCRKYYIC 184


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 79  FENVFYKNSIYRHHLHNDCELCF 147
           +EN FY+         N C  CF
Sbjct: 675 YENKFYRQEAQWTSSDNPCTTCF 697


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,018
Number of Sequences: 336
Number of extensions: 3813
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)