Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_L09
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 26 1.1
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 27 1.1
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 27 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 26 1.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 26 1.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.5
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 26 1.9
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 26 1.9
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 26 1.9
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 26 1.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 2.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 2.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 3.0
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 25 3.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 4.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 4.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 26 4.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.6
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 24 5.0
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 26 5.3
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 24 5.4
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 26 5.7
AL117195-26|CAB55037.1| 153|Caenorhabditis elegans Hypothetical... 26 6.0
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 23 6.7
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 23 6.8
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 23 6.8
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 23 6.8
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 23 6.9
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 24 7.0
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 24 7.0
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 24 7.0
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 26 8.9
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P PP P PPPPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPP 583
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 589 PPPPPPPP 596
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.5 bits (58), Expect(2) = 1.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPPP 886
PPS P PPPPPP
Sbjct: 782 PPSPLTAPIPPPPPPPPP 799
Score = 22.2 bits (45), Expect(2) = 1.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPP P
Sbjct: 793 PPPPPPPMLP 802
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.5 bits (58), Expect(2) = 1.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPPP 886
PPS P PPPPPP
Sbjct: 681 PPSPLTAPIPPPPPPPPP 698
Score = 22.2 bits (45), Expect(2) = 1.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPP P
Sbjct: 692 PPPPPPPMLP 701
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 25.8 bits (54), Expect(2) = 1.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 63 PPPPPPPPPP 72
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P PP P P PPPP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPP 49
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 25.8 bits (54), Expect(2) = 1.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 143 PPPPPPPPAP 152
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPP 883
PP + P PPPPP
Sbjct: 134 PPPTPAAPPPPPPPPPP 150
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPPXP 892
P PP P PPPPPP P
Sbjct: 660 PMPVPPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPPXP 892
P PP P PPPPPP P
Sbjct: 660 PMPVPPPGGLGGFMPPPPPPPPMP 683
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 267 PPPPPPPPKP 276
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPP 883
PP P PPPPP
Sbjct: 258 PPREKSVPPPPPPPPPP 274
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 267 PPPPPPPPKP 276
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPP 883
PP P PPPPP
Sbjct: 258 PPREKSVPPPPPPPPPP 274
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 252 PPPPPPPPKP 261
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPP 883
PP P PPPPP
Sbjct: 243 PPREKSVPPPPPPPPPP 259
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 252 PPPPPPPPKP 261
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPP 883
PP P PPPPP
Sbjct: 243 PPREKSVPPPPPPPPPP 259
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPPXP 892
P PP P PPPPPP P
Sbjct: 37 PACAPPPPPMCGCAPPPPPPPPPP 60
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P PP PPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPP 747
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P PP PPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPP 747
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPPP 886
PP P PPPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P PP PPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPP 330
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 353 PPPPPPPP 360
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
PS+ P PPPPPP
Sbjct: 349 PSAAPPTNIPPPPPPPP 365
Score = 23.4 bits (48), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 359 PPPPPPPP 366
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPPXP 892
P PP P PPPPPP P
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPP 93
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPPXP 892
P PP P PPPPPP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPP 1363
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -3
Query: 439 PPPXFXFXXXGXXKKGXFXXXNPPPFFXX--GXGGXTPPXPPPXXGGG 302
PPP F PPP G G PP PPP G G
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P P + P PPPPPP
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPP 617
Score = 23.4 bits (48), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 631 PPPPPPPP 638
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 631 PPPPPPPP 638
Score = 23.4 bits (48), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 650 PPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -3
Query: 439 PPPXFXFXXXGXXKKGXFXXXNPPPFFXX--GXGGXTPPXPPPXXGGG 302
PPP F PPP G G PP PPP G G
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPP 886
P P + P PPPPPP
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPP 443
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 457 PPPPPPPP 464
Score = 23.4 bits (48), Expect(2) = 4.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 457 PPPPPPPP 464
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 476 PPPPPPPP 483
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 26 PPPPPPPPKP 35
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPPP 886
P S+ PPPPPP
Sbjct: 15 PESAPAATTPQPPPPPPP 32
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 346 GGXTPPXPPPXXGGG 302
GG PP PPP GGG
Sbjct: 50 GGCAPPPPPPACGGG 64
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 346 GGXTPPXPPPXXGGG 302
GG PP PPP GGG
Sbjct: 107 GGCAPPPPPPACGGG 121
Score = 24.2 bits (50), Expect(2) = 4.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 318 GGGXGGVXPPXPXKKKGGG 374
GG GG PP P GGG
Sbjct: 103 GGCGGGCAPPPPPPACGGG 121
Score = 23.4 bits (48), Expect(2) = 4.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 303 PPPXXGGGXGG 335
PPP GGG GG
Sbjct: 57 PPPACGGGCGG 67
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 821 PXXXPPSSXFXXXXPXPPPPPPXP 892
P PP + P PPPPPP P
Sbjct: 499 PPPLPPIATPSSVPPPPPPPPPPP 522
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 7/55 (12%)
Frame = -3
Query: 445 GXPPPXFX-----FXXXGXXKKGXFXXXNPPPFFXXGXGGXTPPXPP--PXXGGG 302
G PPP F +G PPP F G GG P PP GGG
Sbjct: 754 GAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGG 808
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
P + P PPPPPP
Sbjct: 1003 PKAPAGPGGPPPPPPPP 1019
Score = 23.4 bits (48), Expect(2) = 5.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 1013 PPPPPPPP 1020
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 25.8 bits (54), Expect(2) = 5.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 306 PKPPPPPPPP 315
Score = 21.4 bits (43), Expect(2) = 5.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 833 PPSSXFXXXXPXPPPPPP 886
PP PPPPPP
Sbjct: 297 PPRRTPQPHPKPPPPPPP 314
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 23.8 bits (49), Expect(2) = 5.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
P + P PPPPPP
Sbjct: 242 PKAPAGPGGPPPPPPPP 258
Score = 23.4 bits (48), Expect(2) = 5.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 252 PPPPPPPP 259
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 25.8 bits (54), Expect(2) = 5.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 141 PPPPPPPPLP 150
Score = 21.4 bits (43), Expect(2) = 5.7
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPP 883
P + P PPPPP
Sbjct: 133 PRNLLLSKPPPPPPPP 148
>AL117195-26|CAB55037.1| 153|Caenorhabditis elegans Hypothetical
protein Y57A10A.32 protein.
Length = 153
Score = 25.8 bits (54), Expect(2) = 6.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 80 PAPPPPPPPP 89
Score = 21.4 bits (43), Expect(2) = 6.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 839 SSXFXXXXPXPPPPPP 886
++ F PPPPPP
Sbjct: 73 AAAFEEPPAPPPPPPP 88
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 23.4 bits (48), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 754 PPPPPPPP 761
Score = 23.4 bits (48), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 755 PPPPPPPP 762
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 516 PLPPPPPP 523
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 519 PPPPPPKP 526
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 516 PLPPPPPP 523
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 519 PPPPPPKP 526
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 3 PPPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 4 PPPPPPPP 11
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 23.4 bits (48), Expect(2) = 6.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 863 PXPPPPPP 886
P PPPPPP
Sbjct: 476 PPPPPPPP 483
Score = 23.4 bits (48), Expect(2) = 6.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PPPPPPXP 892
PPPPPP P
Sbjct: 477 PPPPPPPP 484
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
PS P PPPPPP
Sbjct: 179 PSFMTSLQAPPPPPPPP 195
Score = 22.6 bits (46), Expect(2) = 7.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPP P
Sbjct: 189 PPPPPPPQNP 198
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
PS P PPPPPP
Sbjct: 179 PSFMTSLQAPPPPPPPP 195
Score = 22.6 bits (46), Expect(2) = 7.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPP P
Sbjct: 189 PPPPPPPQNP 198
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
PS P PPPPPP
Sbjct: 179 PSFMTSLQAPPPPPPPP 195
Score = 22.6 bits (46), Expect(2) = 7.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPP P
Sbjct: 189 PPPPPPPQNP 198
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 25.8 bits (54), Expect(2) = 8.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXPPPPPPXP 892
P PPPPPP P
Sbjct: 346 PPPPPPPPHP 355
Score = 20.6 bits (41), Expect(2) = 8.9
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +2
Query: 836 PSSXFXXXXPXPPPPPP 886
P + P PP PPP
Sbjct: 306 PDVVYHMAVPPPPIPPP 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,131,696
Number of Sequences: 27780
Number of extensions: 352759
Number of successful extensions: 4668
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2519
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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