Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L08
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.26 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.61 
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    31   1.1  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    31   1.1  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    31   1.1  
Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical p...    28   7.5  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 88  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 177
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -3

Query: 529 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 425
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 466  SEGSWVYEKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVSRE 597
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 487  EKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVSRE 597
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 466  SEGSWVYEKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVSRE 597
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 487  EKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVSRE 597
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 466  SEGSWVYEKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVSRE 597
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 487  EKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVSRE 597
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical
           protein C30H6.4 protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +1

Query: 559 EPTETTSTNVSREEMEFTTXSTCG-DVDVGLETAXKTNEIAXSCTSDHXTAVXIXXRCRS 735
           EPT +TST  +   M+ TT ST          T    +    S T    T + I  +C S
Sbjct: 300 EPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI-EKCTS 358

Query: 736 SC 741
           +C
Sbjct: 359 NC 360


>Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical
           protein T05G5.12 protein.
          Length = 92

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 415 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRXVAEPTETTSTNVS 591
           S F  Y K+++   D   + ++ Y+K     T P+ QK  + S    A    T ST  S
Sbjct: 5   SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSS 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,322,644
Number of Sequences: 27780
Number of extensions: 309126
Number of successful extensions: 889
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)