Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L06
         (937 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.091
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.091
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    28   0.12 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   6.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   7.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 0.091
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 501 SXXXANPYMLXLIHISXXKNPQXXXPPPPXPPXPPPXSPXPAXP 632
           S   A+PYML    ++  +      PPPP P   PP +P    P
Sbjct: 712 SVSVASPYMLQS-PLTPHEAFDVKLPPPPHPHHQPPRNPVGTNP 754



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 577 PPPPXPPXPPPXPPXPXXP 633
           PPPP P   PP  P    P
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.091
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 501 SXXXANPYMLXLIHISXXKNPQXXXPPPPXPPXPPPXSPXPAXP 632
           S   A+PYML    ++  +      PPPP P   PP +P    P
Sbjct: 604 SVSVASPYMLQS-PLTPHEAFDVKLPPPPHPHHQPPRNPVGTNP 646



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 577 PPPPXPPXPPPXPPXPXXP 633
           PPPP P   PP  P    P
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +1

Query: 559 IPXHXXPPPPXPPXPPPXPPXPXXPPLPRV 648
           IP H    PP    PP   P P  PP  R+
Sbjct: 60  IPPHHYGGPPSGGQPPQGMPYPRFPPYDRM 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 604  PPXPPXPXXPPLP 642
            PP PP    PPLP
Sbjct: 1376 PPIPPTSEKPPLP 1388


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 6/25 (24%)
 Frame = +1

Query: 586 PXPPXPPPX------PPXPXXPPLP 642
           P P  PP        PP P  PPLP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLP 184



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 561 PQXXXPPPPXPPXPPPXSPXPA 626
           P    PP P PP  PP    P+
Sbjct: 176 PLPQVPPLPLPPIFPPTMINPS 197


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 204 HRGLKLSLAPLAMLHSRPCCY 142
           H G+  +  P+ +LH  P C+
Sbjct: 181 HMGVHRAKPPMRVLHQCPVCH 201


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 120 PTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHE 227
           P N I+SGN + +  + + + K     G L + +++
Sbjct: 43  PVNDIISGNILPLYTSAENIFKQLREWGRLYYPIYK 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,070
Number of Sequences: 336
Number of extensions: 3820
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26271982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)