Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_L05
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 116 6e-27
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 112 7e-26
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 107 2e-24
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 93 4e-20
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 89 6e-19
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 83 7e-17
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 71 2e-13
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 2e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 36 0.006
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 2.0
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 4.7
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 27 4.7
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.2
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 8.2
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 116 bits (278), Expect = 6e-27
Identities = 51/66 (77%), Positives = 56/66 (84%)
Frame = +2
Query: 491 LPRGDGTGGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 670
+ +GDGTGG+SIYG RF DENFKL H G LSMANAG D+NGSQFFITTVKTPWLDG H
Sbjct: 90 ITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHH 149
Query: 671 VVFGKV 688
VVFG+V
Sbjct: 150 VVFGEV 155
Score = 103 bits (247), Expect = 3e-23
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1
Query: 283 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 462
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 463 KNFMIQGGDFTKG 501
NFMIQGGD TKG
Sbjct: 81 PNFMIQGGDITKG 93
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 112 bits (269), Expect = 7e-26
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +2
Query: 497 RGDGTGGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVV 676
RG+GTGG+SIYGE+F DENF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HVV
Sbjct: 67 RGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVV 126
Query: 677 FGKV 688
FG+V
Sbjct: 127 FGEV 130
Score = 69.3 bits (162), Expect = 7e-13
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +1
Query: 313 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDF 492
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+QGGDF
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 493 TKG 501
T+G
Sbjct: 66 TRG 68
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 107 bits (257), Expect = 2e-24
Identities = 50/64 (78%), Positives = 55/64 (85%)
Frame = +2
Query: 497 RGDGTGGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVV 676
RG+GTGG SIYGE+FEDENF+LKH LSMANAG +TNGSQFFITTV TP LDG+HVV
Sbjct: 72 RGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVV 131
Query: 677 FGKV 688
FGKV
Sbjct: 132 FGKV 135
Score = 68.5 bits (160), Expect = 1e-12
Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +1
Query: 304 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 471
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 472 MIQGGDFTKG 501
M+QGGDFT+G
Sbjct: 64 MLQGGDFTRG 73
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 93.5 bits (222), Expect = 4e-20
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +2
Query: 494 PRGDGTGGRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 670
P G G GG SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT TPWLDG+H
Sbjct: 57 PTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKH 116
Query: 671 VVFGKV 688
+FG+V
Sbjct: 117 TIFGRV 122
Score = 50.0 bits (114), Expect = 4e-07
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 337 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFT 495
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQGGD T
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPT 58
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 89.4 bits (212), Expect = 6e-19
Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +2
Query: 500 GDGTGGRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVV 676
GDGTG +I+ R F DENF LKH G LSMANAGKD+NG QFFITTV +LDG+HVV
Sbjct: 77 GDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVV 136
Query: 677 FGKV 688
FG+V
Sbjct: 137 FGEV 140
Score = 60.1 bits (139), Expect = 4e-10
Identities = 36/73 (49%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +1
Query: 307 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 462
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 463 KNFMIQGGDFTKG 501
+ FMIQGGDF G
Sbjct: 65 QGFMIQGGDFVSG 77
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 688 LKXMDVVQKIEMTVTGANDRPVKDVVI 768
++ D+V++IE T GAN RP +V I
Sbjct: 141 IEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +2
Query: 494 PRGDGTGGRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 670
P GDGTGG SI+ + FEDE + LKH +SMAN+G +TNGSQFFITT TPWLDG+H
Sbjct: 510 PLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKH 569
Query: 671 VVFGK 685
+F +
Sbjct: 570 TIFAR 574
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1
Query: 343 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGD 489
G I I L+ + PK +NF A E Y + FHR+IKNFMIQGGD
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGD 509
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 70.9 bits (166), Expect = 2e-13
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 494 PRGDGTGGRSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 670
P G G GG+SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI LD +H
Sbjct: 331 PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKH 390
Query: 671 VVFGKV 688
+FG+V
Sbjct: 391 TIFGRV 396
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +1
Query: 337 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGD 489
N G I I L P NF QLA++ Y+ + FHR I FMIQGGD
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGD 330
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 54.4 bits (125), Expect = 2e-08
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 494 PRGDGTGGRSIYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 670
P G G GG SIYGE F E +L+ G + MA + N SQFFIT TP +G+
Sbjct: 68 PTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQ 127
Query: 671 VVFGKV 688
+FG+V
Sbjct: 128 TLFGRV 133
Score = 43.6 bits (98), Expect = 4e-05
Identities = 26/51 (50%), Positives = 30/51 (58%)
Frame = +1
Query: 343 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFT 495
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQGGD T
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPT 69
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 331 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGD 489
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q GD
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGD 55
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 791 TTSVFVSDITTSLTGRSFAPVTVISIFCTTS 699
TT+V+V+++ T G PVT SIF T +
Sbjct: 466 TTTVWVTEVFTRYLGDDSTPVTSSSIFSTAT 496
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -3
Query: 201 FSSFPCYFYKIRFECLFFQNLRYKIRNLI*KPSQFTILLIRNNHTVLSLASSQILRIPY 25
FSSF F+++ F C FF L Y + F L +HT++S + + L++PY
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLYSF--IFATLHAFVFLF---SHTLVS-SQFRRLKLPY 63
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 521 CALQFHHPLVKSPPWIMKFLITLWNLLP 438
C+L+F+ VK P + FL+ L +L+P
Sbjct: 275 CSLEFNDNDVKGPKQVALFLVRLSSLIP 302
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 567 TMVLVGYLWLMQAKTQMDLNFSSQLLRHPG*MADMLFSVKFKXNG 701
T VL + + K Q+DLNF++ + +P DM F NG
Sbjct: 698 TPVLDQTMSMFPFKDQLDLNFAAANVYNPNVFDDMGLDCSFYGNG 742
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 329 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 186
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,420,400
Number of Sequences: 5004
Number of extensions: 72706
Number of successful extensions: 206
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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