Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_L04
         (1235 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   4.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   4.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   8.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   8.2  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 631 PTXXPXXPPTXPPPPP 678
           PT     P T PPPPP
Sbjct: 203 PTEDCDVPSTIPPPPP 218


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = +1

Query: 604 PXXAXGAAXPTXXPXXPPTXPPPPPXXXXPP 696
           P    GAA P       P   PPP     PP
Sbjct: 116 PTGHPGAALPFFCHNGDPLSQPPPAHMGIPP 146


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = +1

Query: 604 PXXAXGAAXPTXXPXXPPTXPPPPPXXXXPP 696
           P    GAA P       P   PPP     PP
Sbjct: 8   PTGHPGAALPFFCHNGDPLSQPPPAHMGIPP 38


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 643 PXXPPTXPPPPPXXXXP 693
           P  PPT  PPP     P
Sbjct: 95  PTTPPTPSPPPEERLTP 111


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = -1

Query: 896 PXPXRXPRLXPPPSXGXAXGPXVPPPXRXSSXXPRS 789
           P P       P  S G       PPP   SS  P S
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPPATTSSGSPAS 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.308    0.143    0.481 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,704
Number of Sequences: 336
Number of extensions: 2758
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36171872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)