Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K24
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.87
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.0
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 30 2.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 30 2.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 30 2.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.5
AY081844-1|AAL91661.1| 362|Caenorhabditis elegans heparan 6-O s... 29 4.7
AC024755-9|AAF59640.2| 362|Caenorhabditis elegans Heparan sulph... 29 4.7
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.87
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = +2
Query: 722 PGLSTXPXXPNLNGRXNSAVXSPDLPXXDPXXPPLHXSFLSXGXPPATXSRIPXXPGDXP 901
P +S+ P P + G A ++P P PPL + G PP P G P
Sbjct: 536 PPVSSIPPPPPIAGLL--AANGTNVPIPPPPPPPLPQNL--SGAPPPPPPPPPMLGGPPP 591
Query: 902 PPXAP 916
PP P
Sbjct: 592 PPPPP 596
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/95 (28%), Positives = 32/95 (33%)
Frame = +2
Query: 635 PPLVFXXPGXLXPXPGGSCXXSNCXPXLAPGLSTXPXXPNLNGRXNSAVXSPDLPXXDPX 814
PP V P + P PG + P + G+ P P GR P +P P
Sbjct: 267 PPSVTPMPPPMPPTPGMT---PRPPPPPSSGMWPPPPPPP-PGRTPGP---PGMPGMPPP 319
Query: 815 XPPLHXSFLSXGXPPATXSRIPXXPGDXPPPXAPR 919
PP G P PG PPP PR
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/95 (28%), Positives = 32/95 (33%)
Frame = +2
Query: 635 PPLVFXXPGXLXPXPGGSCXXSNCXPXLAPGLSTXPXXPNLNGRXNSAVXSPDLPXXDPX 814
PP V P + P PG + P + G+ P P GR P +P P
Sbjct: 277 PPSVTPMPPPMPPTPGMT---PRPPPPPSSGMWPPPPPPP-PGRTPGP---PGMPGMPPP 329
Query: 815 XPPLHXSFLSXGXPPATXSRIPXXPGDXPPPXAPR 919
PP G P PG PPP PR
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Frame = +2
Query: 677 PGGSCXXSNCXPXLAPGLSTXPXXPNLNGRXNSAVXSPDLPXXD----PXXPPLHXSFLS 844
P S S+ P + G P P + G LP P PP +S
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Query: 845 XGXPPATXSRIPXXPGDXPPPXAP 916
G PP P PG PPP P
Sbjct: 756 GGPPPP-----PPPPGGCPPPPPP 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +2
Query: 740 PXXPNLNGRXNSAVXSPDLPXXD--PXXPPLHXSFLSXGXPPATXSRIPXXPGDXPPPXA 913
P NL+ SA S LP P PP PP +P G PPP
Sbjct: 688 PTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Query: 914 P 916
P
Sbjct: 748 P 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Frame = +2
Query: 677 PGGSCXXSNCXPXLAPGLSTXPXXPNLNGRXNSAVXSPDLPXXD----PXXPPLHXSFLS 844
P S S+ P + G P P + G LP P PP +S
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Query: 845 XGXPPATXSRIPXXPGDXPPPXAP 916
G PP P PG PPP P
Sbjct: 756 GGPPPP-----PPPPGGCPPPPPP 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +2
Query: 740 PXXPNLNGRXNSAVXSPDLPXXD--PXXPPLHXSFLSXGXPPATXSRIPXXPGDXPPPXA 913
P NL+ SA S LP P PP PP +P G PPP
Sbjct: 688 PTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Query: 914 P 916
P
Sbjct: 748 P 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Frame = +2
Query: 677 PGGSCXXSNCXPXLAPGLSTXPXXPNLNGRXNSAVXSPDLPXXD----PXXPPLHXSFLS 844
P S S+ P + G P P + G LP P PP +S
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 338
Query: 845 XGXPPATXSRIPXXPGDXPPPXAP 916
G PP P PG PPP P
Sbjct: 339 GGPPPP-----PPPPGGCPPPPPP 357
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +2
Query: 740 PXXPNLNGRXNSAVXSPDLPXXD--PXXPPLHXSFLSXGXPPATXSRIPXXPGDXPPPXA 913
P NL+ SA S LP P PP PP +P G PPP
Sbjct: 271 PTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
Query: 914 P 916
P
Sbjct: 331 P 331
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 549 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 600
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 840 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 891
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 855 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 906
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 855 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 906
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 549 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 600
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 840 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 891
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 855 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 906
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 764 RXNSAVXSPDLPXXDPXXPPLHXSFLS-XGXPPATXSRIPXXPGDXPPPXAP 916
R S + PD+ P PP H ++ G PP+ S P PP P
Sbjct: 855 RHQSVMFPPDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP 906
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +2
Query: 683 GSCXXSNCXPXLAPGLSTXPXXPNLNGRXNSAVXSPDLPXXDPXXPPLHXSFLSXGXPPA 862
G C P PG P P G+ + P P PP PP
Sbjct: 88 GCCLPGPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPG 147
Query: 863 TXSRIPXXPGDXPPP 907
P PGD PP
Sbjct: 148 Q----PGIPGDNGPP 158
>AY081844-1|AAL91661.1| 362|Caenorhabditis elegans heparan 6-O
sulfotransferase HST-6 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +2
Query: 59 NIHHYHDIRKRKRKASKKNETAQ*IVIYLYLNENEPHVIRKFNVEIMNN 205
+ ++Y DI +R+ A + N+T+ +++++++ + KF V N
Sbjct: 56 DFYNYEDIVQREDTALRFNKTSNDVIVFVHIQKTAGTTFEKFLVRYQQN 104
>AC024755-9|AAF59640.2| 362|Caenorhabditis elegans Heparan
sulphotransferase protein 6 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +2
Query: 59 NIHHYHDIRKRKRKASKKNETAQ*IVIYLYLNENEPHVIRKFNVEIMNN 205
+ ++Y DI +R+ A + N+T+ +++++++ + KF V N
Sbjct: 56 DFYNYEDIVQREDTALRFNKTSNDVIVFVHIQKTAGTTFEKFLVRYQQN 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,578,414
Number of Sequences: 27780
Number of extensions: 191787
Number of successful extensions: 398
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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