Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_K21
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660           68   1e-11
06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749     56   3e-08
01_06_0783 + 31975261-31975398,31975583-31975726                       49   4e-06
01_05_0324 - 20946774-20946935,20947301-20947780                       45   7e-05
02_04_0361 - 22359278-22359439,22362291-22362728                       39   0.005
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504...    29   5.1  
06_01_0125 + 970746-970967,971126-971226,971897-972026,972108-97...    28   9.0  

>01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660
          Length = 111

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +1

Query: 103 KAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTW 252
           K  +K+ADM EEM+Q+A D A  A EK  +EKDIA +IKKEFDK + PTW
Sbjct: 46  KIQLKSADMKEEMRQEAFDIARVAFEKHTMEKDIAEYIKKEFDKNHGPTW 95


>06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749
          Length = 135

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = +1

Query: 91  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTW 252
           +   K  IK+A+M EEM+Q+A D    A EK  +EKDI  +I KEFDK + PTW
Sbjct: 54  LAGHKIQIKSANMKEEMRQEAFDIDRVAFEKHTMEKDIVEYI-KEFDKNHGPTW 106


>01_06_0783 + 31975261-31975398,31975583-31975726
          Length = 93

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = +1

Query: 91  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIE--KDIAAFIKKEFDKKYNPTWAFAS 264
           M + KA++++ DM  +MQ  A+  A +AL++F++   + IAA IKKEFD  + P W    
Sbjct: 1   MLEGKAMVEDTDMPVKMQLQAMSAAYKALDRFDVLDCRSIAAHIKKEFDMIHGPGWQCVV 60

Query: 265 WVVILGSYVTH 297
                G Y TH
Sbjct: 61  G-ASFGCYFTH 70


>01_05_0324 - 20946774-20946935,20947301-20947780
          Length = 213

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
 Frame = +1

Query: 121 ADMSEEMQQDAVDCATQA---LEKFNIEKDIAAFIKKEFDKKYNPTWAFASWVVILGSYV 291
           ADMS  MQ  A  CA ++   L+KF+  + +A  +KKEFDK Y PTW         GS+V
Sbjct: 125 ADMSPFMQLHAFRCAKRSHDSLDKFS-SRQLAHDVKKEFDKVYGPTW-HCIVGTSYGSFV 182

Query: 292 TH 297
           TH
Sbjct: 183 TH 184


>02_04_0361 - 22359278-22359439,22362291-22362728
          Length = 199

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +1

Query: 67  KQKQTQDKMCDRKAVIK--NADMSEEMQQDAVDCATQALEKFNI--EKDIAAFIKKEFDK 234
           K+K+ +    +RK  ++   ADM   MQ+ AV  A  A+        K +A  +KKEFD 
Sbjct: 91  KEKEMEKGKEERKVSVRVRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDA 150

Query: 235 KYNPTWAFASWVVILGSYVTH 297
            Y P W         GSYVTH
Sbjct: 151 TYGPAWHCIVGTG-FGSYVTH 170


>12_01_0612 -
           5044639-5044858,5045010-5045167,5045440-5045684,
           5046006-5046294,5047540-5048561,5049320-5049389
          Length = 667

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 115 KNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYN 243
           +N  + EE  Q  +DC  +  E+F+ E+D    IK   +KK N
Sbjct: 590 ENCKLREEQIQRIIDCQVKDAEEFDAEQD--ELIKTHEEKKAN 630


>06_01_0125 +
           970746-970967,971126-971226,971897-972026,972108-972333,
           972400-972502,972519-972594,972710-973333
          Length = 493

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 70  QKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEK 183
           Q + ++K C  KA +   + S + +QD +D   Q  EK
Sbjct: 259 QHRKRNKFCGHKAAVDRLNESGKNEQDRIDDVVQMYEK 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,824,570
Number of Sequences: 37544
Number of extensions: 397756
Number of successful extensions: 780
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)