Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_K21
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00043-8|AAC77510.1|   89|Caenorhabditis elegans Dynein light ch...   117   1e-26
Z68507-5|CAA92827.2|   90|Caenorhabditis elegans Hypothetical pr...    52   4e-07
AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical...    45   7e-05
AL161711-3|CAL63993.1|  129|Caenorhabditis elegans Hypothetical ...    38   0.013
AL161711-2|CAD31700.1|  111|Caenorhabditis elegans Hypothetical ...    36   0.030
AL161711-1|CAE17960.1|  134|Caenorhabditis elegans Hypothetical ...    33   0.37 
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z68222-3|CAA92499.1|  253|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U00043-8|AAC77510.1|   89|Caenorhabditis elegans Dynein light chain
           protein 1 protein.
          Length = 89

 Score =  117 bits (282), Expect = 1e-26
 Identities = 56/72 (77%), Positives = 62/72 (86%)
 Frame = +1

Query: 91  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWAFASWV 270
           M DRKAVIKNADMS++MQQDA+DCATQALEK+NIEKDIAA+IKKEFDKKYNPTW      
Sbjct: 1   MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTW-HCIVG 59

Query: 271 VILGSYVTHETR 306
              GSYVTHET+
Sbjct: 60  RNFGSYVTHETK 71


>Z68507-5|CAA92827.2|   90|Caenorhabditis elegans Hypothetical
           protein M18.2 protein.
          Length = 90

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 20/54 (37%), Positives = 32/54 (59%)
 Frame = +1

Query: 91  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTW 252
           M + K  +K  DM +  +   +    +A   +NI+KD+AAF+K+E DKK+  TW
Sbjct: 1   MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATW 54


>AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.43 protein.
          Length = 186

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 25/87 (28%), Positives = 46/87 (52%)
 Frame = +1

Query: 40  DFEKFVIYPKQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIK 219
           D EK + +  + +   K  +  A ++++ M   M+Q+A   A +++  +++E DIA  +K
Sbjct: 36  DNEKALRFELECRRTGKCREIVADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLK 95

Query: 220 KEFDKKYNPTWAFASWVVILGSYVTHE 300
             FD++Y P W         GS+VT E
Sbjct: 96  MAFDREYGPDW-HCICGKHFGSFVTFE 121


>AL161711-3|CAL63993.1|  129|Caenorhabditis elegans Hypothetical
           protein Y10G11A.2b protein.
          Length = 129

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +1

Query: 40  DFEKFVIYPKQKQTQDKMCD-RKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFI 216
           DF++     K ++  +K       +I++ ++  E  +++      AL+   IE +IA+F+
Sbjct: 27  DFDELKESRKWREPPEKALRFENVIIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFM 86

Query: 217 KKEFDKKYNPTW 252
           K++FD KY   W
Sbjct: 87  KRKFDAKYGGHW 98


>AL161711-2|CAD31700.1|  111|Caenorhabditis elegans Hypothetical
           protein Y10G11A.2a protein.
          Length = 111

 Score = 36.3 bits (80), Expect = 0.030
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +1

Query: 109 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTW 252
           +I++ ++  E  +++      AL+   IE +IA+F+K++FD KY   W
Sbjct: 33  IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKYGGHW 80


>AL161711-1|CAE17960.1|  134|Caenorhabditis elegans Hypothetical
           protein Y10G11A.3 protein.
          Length = 134

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 40  DFEKFVIYPKQKQTQDKMCD-RKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFI 216
           DF++     K ++  +K       +I+  ++  E  +++      AL+   IE +IA+F+
Sbjct: 26  DFDELKESRKWREPPEKALRFENVIIQETNLPFEQVEESKKMLGDALQLCGIENEIASFM 85

Query: 217 KKEFDKKYNPTWAFASW 267
           K++FD K   T A   W
Sbjct: 86  KRKFDAK--RTLAMCGW 100


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical
           protein C41A3.1 protein.
          Length = 7829

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -1

Query: 354 GASIAHLSPGRK*MKWASLVCHIRAQNYDPRCKCPGRIV 238
           G  I  L P RK  K   L+C + A  +DP  K  GRIV
Sbjct: 661 GEEILELDPVRKVQK---LICQLFACGFDPAVKFRGRIV 696


>Z68222-3|CAA92499.1|  253|Caenorhabditis elegans Hypothetical
           protein ZK1251.3 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 208 AFIKKEFDKKYNPTWAF-ASWVVILGSYVTHETRPLHLLS 324
           AF + EFD  +   + F  +W+ ++G ++TH    LHL++
Sbjct: 129 AFYQPEFDTLHPKFFVFLGAWLFVIG-FITHCVSDLHLIT 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,879,286
Number of Sequences: 27780
Number of extensions: 345756
Number of successful extensions: 796
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)