Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K19
(747 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.025
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.043
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.057
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.057
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.13
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.70
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.8
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 2.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.8
SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||M... 25 8.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 8.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.025
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXPPXXK 706
PPPP P P P P P G P P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPA-----PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Query: 707 XPXXPXXSPPP 739
+P P
Sbjct: 787 AGGSRYYAPAP 797
Score = 32.7 bits (71), Expect = 0.057
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 677 PPPPXPPXXKXPXXPXXSPPPPP 745
PPPP PP P PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.40
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 553 PXXPPPPXXXXXPXXXXXXXPPXGXXXXXXPXXXXXXXXXKTPPPXPPXXKKXXXPXXFP 732
P PPP P PP P PPP PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP-----------PPPPPPGVAGAGPPP--P 778
Query: 733 PPPPP 747
PPPPP
Sbjct: 779 PPPPP 783
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +2
Query: 674 KPPPPXPPXXKXP-XXPXXSPPPPP 745
K PPP PP P P P PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPP 754
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.043
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 677 PPPPXPPXXKXPXXPXXSPPPPP 745
PPPP PP + P P PPPPP
Sbjct: 10 PPPPPPPGFEPPSQP--PPPPPP 30
Score = 31.5 bits (68), Expect = 0.13
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 677 PPPPXPPXXKXPXXPXXSPPPPP 745
PPPP PP P P PPPPP
Sbjct: 9 PPPPPPPPGFEP--PSQPPPPPP 29
Score = 29.5 bits (63), Expect = 0.53
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 679 PPPXPPXXKKXXXPXXFPPPPPP 747
PPP PP + P PPPPPP
Sbjct: 11 PPPPPPGFEPPSQP---PPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.057
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = -1
Query: 744 GGGGGEXXGXXGFFXXGGXGGGGFXXXXXXXXXXXGXXGXPXG-GXXXXXXXGXXXXXGG 568
GGG G G G G G GGF G G G G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 567 XGGGXXXXXXGGGG 526
GGG G GG
Sbjct: 247 FGGGLGGFGGGPGG 260
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = -2
Query: 746 GGGGGGKXXGXXXFXXXGGXGGGVXCXXXXXXXXGXXXXXXPXGGXXXXXXXGXXXXXGG 567
GGG GG G F GG GG G G G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 566 -GGXXGXXXXXXGG 528
GG G GG
Sbjct: 254 FGGGPGGFGGGPGG 267
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.057
Identities = 23/85 (27%), Positives = 25/85 (29%), Gaps = 12/85 (14%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXL----PXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXP 694
PPP PP PP P PP P +PPPP P
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 695 PXXKXPXXPXXS--------PPPPP 745
P + P PPPPP
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 30.3 bits (65), Expect = 0.30
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXPPXXK 706
PPPP P PP P P P N PPP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Query: 707 XPXXP 721
P P
Sbjct: 400 APALP 404
Score = 29.9 bits (64), Expect = 0.40
Identities = 29/132 (21%), Positives = 33/132 (25%), Gaps = 1/132 (0%)
Frame = +2
Query: 353 PXXXXGGGPXKXXXPPPPXXXXXXGGXKXKXXPXXFXKKKXPRXXPXXXXKXXXXXXXPP 532
P G PPPP G PR P + PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP------PP 378
Query: 533 PPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPP-PPXPPXXKX 709
PP PP +P PP G + P PP P
Sbjct: 379 LSSSRAVSNPPAPPPA--IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Query: 710 PXXPXXSPPPPP 745
P P +P PP
Sbjct: 437 PSLPMGAPAAPP 448
Score = 29.1 bits (62), Expect = 0.70
Identities = 27/120 (22%), Positives = 30/120 (25%), Gaps = 3/120 (2%)
Frame = +2
Query: 395 PPPPXXXXXXGGXKXKXXPXXFXKKKXPRXXPXXXXKXXXXXXXPPPPXXXXXXPPPXPP 574
PPPP G + P P + PP P P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL---PPLGNASRTSTPPVP 418
Query: 575 XXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPP--PPXPPXXKX-PXXPXXSPPPPP 745
LP PP P P P PP P P P +P PPP
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/78 (26%), Positives = 21/78 (26%), Gaps = 5/78 (6%)
Frame = +3
Query: 528 PPXXPXXXPXXPPXPPXXXXSXXXXXXXPPXXGXPXX-----PPXXXXXXXXTXNPPPXX 692
PP P P PP S P P PP T PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR--TSTPPVPT 419
Query: 693 PXXXKXXXXPXLPPPPPP 746
P P LPP PP
Sbjct: 420 PPSLPPSAPPSLPPSAPP 437
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/78 (24%), Positives = 21/78 (26%), Gaps = 5/78 (6%)
Frame = +1
Query: 529 PPXXXXXXPXXPPPPXXXXXPXXXXXXXPPXGXXXXXXPXXXXXXXXXKTPPPXPPXXKK 708
PP PPP P PP P + PP PP +
Sbjct: 241 PPERVPSLSAPAPPPIPP--PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSR 298
Query: 709 XXXPXXF-----PPPPPP 747
PPPPPP
Sbjct: 299 VSAAALAANKKRPPPPPP 316
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/74 (24%), Positives = 19/74 (25%)
Frame = +1
Query: 526 PPPXXXXXXPXXPPPPXXXXXPXXXXXXXPPXGXXXXXXPXXXXXXXXXKTPPPXPPXXK 705
PP PPPP PP G P + PPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 706 KXXXPXXFPPPPPP 747
P PPP P
Sbjct: 385 VSNPPA--PPPAIP 396
Score = 25.8 bits (54), Expect = 6.6
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 2/76 (2%)
Frame = +1
Query: 526 PPPXXXXXXPXXPPPPXXXXXPXXXXXXXPPX--GXXXXXXPXXXXXXXXXKTPPPXPPX 699
PPP PPP PP G P P P PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 700 XKKXXXPXXFPPPPPP 747
P PP PP
Sbjct: 423 LPPSAPPS-LPPSAPP 437
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/50 (28%), Positives = 14/50 (28%), Gaps = 5/50 (10%)
Frame = +1
Query: 613 PPXGXXXXXXPXXXXXXXXXKTPPPXPPXXKKXXXPXXFPP-----PPPP 747
PP P PPP PP PP PPPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/71 (25%), Positives = 19/71 (26%), Gaps = 1/71 (1%)
Frame = +2
Query: 530 PPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKP-PPPXPPXXK 706
PP PP PP P P P P PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 707 XPXXPXXSPPP 739
P P +P P
Sbjct: 475 AP-PPAPAPAP 484
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.13
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXP-PXX 703
PP P PP P P PP P PPP P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 704 KXPXXPXXSPPPP 742
+ P P S PP
Sbjct: 1072 EIPSIPAPSGAPP 1084
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/73 (24%), Positives = 20/73 (27%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXPPXXK 706
PP P P P P PP P + PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV--PKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 707 XPXXPXXSPPPPP 745
P P + PP P
Sbjct: 1208 PPVPPPSTAPPVP 1220
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.70
Identities = 18/72 (25%), Positives = 19/72 (26%)
Frame = +2
Query: 530 PPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXPPXXKX 709
PP PP P +P PP P P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP--SA 187
Query: 710 PXXPXXSPPPPP 745
P P PP PP
Sbjct: 188 PSLPSAVPPMPP 199
Score = 28.7 bits (61), Expect = 0.93
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXPXXXXXXXXXNXKPPPPXPPXXK 706
PP P P PP LP P P P K PP PP +
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP--PPLSQ 208
Query: 707 XPXXPXXSPP 736
P S P
Sbjct: 209 APVANTSSRP 218
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 527 PPPPXXXXXXPPPXPPXXXXLPXXXXXXXPPXGXPXXP 640
PPPP PP PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 677 PPPPXPPXXKXPXXPXXSPPPP 742
PPPP P P P +PPPP
Sbjct: 1715 PPPPSAPPM--PAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = +2
Query: 677 PPPPX--PPXXKXPXXPXXSP--PPPP 745
PPPP PP P P P PPPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 668 NXKPPPPXPPXXKXPXXPXXSPPPPP 745
N P P P P SPPPPP
Sbjct: 398 NFLAPTSNVPAYSTPARPTESPPPPP 423
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -1
Query: 744 GGGGGEXXGXXGFFXXGGXGGGGFXXXXXXXXXXXGXXGXPXG-GXXXXXXXGXXXXXGG 568
GG GG G GF GG GG G G G G G G GG
Sbjct: 9 GGRGGSRGGRGGF--NGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Query: 567 XGGG 556
GG
Sbjct: 67 AKGG 70
>SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 201
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 3 VSXTTHYREFLRFEQLWLVLAKPSR 77
VS + Y +FLR Q W A P R
Sbjct: 27 VSVSKSYADFLRVYQSWNTFANPDR 51
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 676 TPPPXPPXXKKXXXPXXFPPPPPP 747
+P P K P PPPPPP
Sbjct: 220 SPEIPPTYTPKQADPLPAPPPPPP 243
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 685 PXPPXXKKXXXPXXFPPPPPP 747
P P P PPPPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPP 1100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,907,003
Number of Sequences: 5004
Number of extensions: 29470
Number of successful extensions: 307
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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