Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K18
(1287 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.062
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 36 0.082
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 35 0.14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 34 0.25
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 33 0.44
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 32 1.0
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.3
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 31 1.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.8
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 31 2.3
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 31 2.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 2.3
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 2.3
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 31 2.3
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 3.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.1
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 4.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 4.1
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 30 4.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 4.1
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.4
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 5.4
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 5.4
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 5.4
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 7.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 7.1
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 29 7.1
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 7.1
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 7.1
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 7.1
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.4
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 9.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 9.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 9.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 9.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 9.4
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 9.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 9.4
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.9 bits (79), Expect = 0.062
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -2
Query: 326 GXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXG 207
G G GRG GG G GG G G R G GG G G
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
Score = 33.5 bits (73), Expect = 0.33
Identities = 24/75 (32%), Positives = 24/75 (32%)
Frame = -2
Query: 473 GXGGXXXGGXXXXXXXREGXXXGGXXXXXXXXXXXXXGXXRXGXSERXXGXEGXGRGXGG 294
G GG GG G GG G G G G GRG GG
Sbjct: 58 GGGGSGWGGGRGGGWGNNGG--GGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Query: 293 XGAGGXGXXXGXRXG 249
G GG G G R G
Sbjct: 116 GGGGGRGGGGGGRGG 130
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 347 GXSERXXGXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXER 195
G G G G GG G GG G G G GG G G R
Sbjct: 71 GWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGR 121
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -2
Query: 347 GXSERXXGXEGXGRGXGGXG-AGGXGXXXGXRXGEEGGXEXXEXGRXGXXERRPQG 183
G G G G G GG G GG G G G GG GR G R G
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 35.5 bits (78), Expect = 0.082
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
P P PP P P +P PP PP P+P PS P
Sbjct: 58 PPCPAQFCPPPPICPPPPPPPMPCPP---PPPPMPRPSCP 94
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 353 RXGXSERXXGXEGXGRGX-GGXGAGGXGXXXGXRXGEEGG 237
R G G G GRG GG GAGG G G G++GG
Sbjct: 60 RGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGG 99
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = -2
Query: 326 GXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXE---RRPQGAEXEQRRGE 156
G G G+G G GG G G G GG + G G + G + R G+
Sbjct: 184 GQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQ 243
Query: 155 XXXGG 141
GG
Sbjct: 244 QGPGG 248
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -2
Query: 347 GXSERXXGXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXERRPQGAEXEQ 168
G R G G G G GG G GG G R G GG + G G +++ Q A+ +Q
Sbjct: 584 GRDHRYQG--GSGNGGGGNGGGGGFGGGGQRSGGGGGFQ--SGGGGGRQQQQQQRAQPQQ 639
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 33.1 bits (72), Expect = 0.44
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 181 APXGRRSXXPXLPXSXLSXPP--SSPXRXPXXLPXPPAPXPPXP 306
AP S P +P + L PP +SP P +P P P PP P
Sbjct: 73 APRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAP 116
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 326 GXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXER 195
G G G GG G GG G G R G+ GG G G R
Sbjct: 6 GRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGR 49
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 338 ERXXGXEGXGRGXGGXGAGGXGXXXGXRXGEEGG 237
+R G GRG GG G GG G G GG
Sbjct: 143 DRFLPQAGGGRGRGGRGRGGDRGGRGSDRGGRGG 176
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 968 PPKKXPXKXGPPGXXNPXXKKGEKKXXXPRGPXXXE 861
PP P GPPG P +G K P GP E
Sbjct: 132 PPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPE 167
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXPXXLSLXP 348
P P PS+P R P P P P PP P + P ++L P
Sbjct: 45 PSAPQDPSPAVPSTPVRVP--YPTAPPPIPPAPEAVTAGPKKMALAP 89
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Frame = +1
Query: 190 GRRSXXPXLPXSXL--SXPPSSPXRXPXX----LPXPPAPXPPXPLPXPSXPXXLSL 342
GR + P LP L S PP+ P P + PP P P P P S P + L
Sbjct: 67 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPL 123
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Frame = +1
Query: 190 GRRSXXPXLPXSXL--SXPPSSPXRXPXX----LPXPPAPXPPXPLPXPSXPXXLSL 342
GR + P LP L S PP+ P P + PP P P P P S P + L
Sbjct: 289 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPL 345
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Frame = -2
Query: 341 SERXXGXEGXGRGXGGXGAGGXGXXXGXRXGEEGG--XEXXEXGRXGXXERRPQGAEXEQ 168
+E G GRG G GG G GEE + E G G R +G
Sbjct: 136 AEEGGAPRGGGRGGSRRGGGGRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRGGRG 195
Query: 167 RRGEXXXGG 141
R G GG
Sbjct: 196 RGGRGGQGG 204
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXPXXLSLXP 348
P P PP P P P PP PP P P PS S P
Sbjct: 49 PICPPQFCPPPPMCPPPPP---PPPPPMCPPPPPPMPSYSPCQSYAP 92
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPAPXPPXPLPXP 318
PP P P PP P PP P+ P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPP 53
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
P LP P P P PP P PP P P P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPAPXPPXP 306
PP SP P LP P P PP P
Sbjct: 483 PPPSPPALPPALPNPNEPPPPPP 505
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 30.7 bits (66), Expect = 2.3
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -2
Query: 347 GXSERXXGXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXERRPQGAEXEQ 168
G + G G G G G G GG G G R G GG G G G +
Sbjct: 106 GGFDDNGGGRG-GNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGNGGGRPQI 164
Query: 167 RRGE 156
GE
Sbjct: 165 SAGE 168
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPAPXPPXP 306
PP P P +P PP P PP P
Sbjct: 500 PPLPPIATPSSVPPPPPPPPPPP 522
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 217 PXSXLSXPPSSPXRXPXXLPXP-PAPXPPXPLPXPSXPXXLSLXP 348
P PP P P P P P PP P P P+ +S P
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPP 533
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 968 PPKKXPXKXGPPGXXNPXXKKGEKKXXXPRGPXXXE 861
PP P GPPG P G K P GP E
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPE 169
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
P P S ++P LP PP P P PL P P
Sbjct: 103 PWSPRKRFSSVETNPGTPRIYLPPPPRPPPVPPLSPPERP 142
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPA-PXPPXPLPXPS 321
PP +P + P P P+ P PP LP PS
Sbjct: 223 PPPAPVQDPAPAPVEPSDPAPPSKLPSPS 251
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPS 321
P LP + PP P P PP P PP L P+
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGPA 603
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 262 PXXLPXPPAPXPPXPLPXPSXPXXL 336
P P PP P PP P P P P L
Sbjct: 512 PPLPPLPPPPPPPKPKPAPVQPISL 536
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 223 SXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXPXXLSLXP 348
S L PPS P +P PP P P P+P P P S P
Sbjct: 240 SCLPPPPS-----PVCMPPPPPPC-PMPIPCPPPPPACSCPP 275
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 217 PXSXLSXPPSSPXRXPXXLPXPPAPXPPXP 306
P S S PP P P PP P PP P
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 217 PXSXLSXPPSSPXRXPXXLPXPPAPXPPXP 306
P S S PP P P PP P PP P
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPAPXPPXPLPXP 318
PP P R P P PP PP P P P
Sbjct: 249 PPGPPTRRPPGPPGPPTRRPPGP-PGP 274
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 262 PXXLPXPPAPXPPXPLPXPSXPXXL 336
P P PP P PP P P P P L
Sbjct: 512 PPLPPLPPPPPPPKPKPAPVQPISL 536
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +1
Query: 238 PPSSPXRX-PXXLPXPPAPXPPXPLPXPSXP 327
PP+ P P P P P PP P P P P
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPAPXP-PXPLPXP 318
PPSSP P PPAP P P P P P
Sbjct: 407 PPSSPPADAAPAP-PPAPEPVPAPAPAP 433
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 326 GXEGXGRGXGGXGAGGXGXXXGXRXGEEGG 237
G G G G G G+GG G G G GG
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGGSGGSGG 813
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 317 GXGRGX-GGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXERRPQG 183
G GRG GG GG G G R G G GR G R +G
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRG 719
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 317 GXGRGX-GGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXERRPQG 183
G GRG GG GG G G R G G GR G R +G
Sbjct: 715 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRG 760
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 317 GXGRGX-GGXGAGGXGXXXGXRXGEEGGXEXXEXGRXGXXERRPQG 183
G GRG GG GG G G R G G GR G R +G
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRG 719
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPP-APXPPXPLPXPS 321
P + PP+ P P P AP PP P P PS
Sbjct: 456 PAVSYDAYEEPPAEPAPPTFLAPTPVIAPPPPEPTPAPS 494
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 29.1 bits (62), Expect = 7.1
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Frame = -2
Query: 353 RXGXSERXXGXEGXGRGXGG--XGAGGXGXXXGXR---XGEEGGXE-XXEXGRXGXXERR 192
R G R G G GRG GG G GG G G G GG G G +
Sbjct: 808 RGGYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGGGFGGVK 867
Query: 191 PQGAEXEQRRGEXXXGG 141
P G + E G
Sbjct: 868 PSGFGGSRNNAEPTSSG 884
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 241 PSSPXRXPXXLPXPPAPXPPXPLPXPS 321
PSSP P PP P P LP PS
Sbjct: 57 PSSPPPAPRPSGQPPGPQGPSDLPGPS 83
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -2
Query: 347 GXSERXXGXEGXGRGXGGXGAGGXGXXXGXRXGEEGGXEXXEXGRXG 207
G R G GRG GG G G G G G GG GR G
Sbjct: 57 GWGGRGGWGRGGGRGYGGRGGGWGGRGGGWGRG-GGGRGFYGGGRRG 102
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.1 bits (62), Expect = 7.1
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Frame = -2
Query: 347 GXSERXXGXEGXGRGX--GGXGAGGX-GXXXGXRXGEEGGXEXXEXGRXGXXERRPQGAE 177
G S+ G GRG G G GG G G R G +GG R G R G +
Sbjct: 78 GGSDPYGQSRGGGRGGFGGSRGGGGYDGGRGGSRGGYDGGRGGYGGDRGGRGGGR-GGYD 136
Query: 176 XEQRRGEXXXGG 141
E+R G G
Sbjct: 137 GERRGGSRWDDG 148
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
protein F44E2.4 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 190 GRRSXXPXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
G P P + L S P P + PP PLP PS P
Sbjct: 599 GEEEGCPRDPPANLDEIISRPVARPTPVTMPPRAPTAKPLPIPSAP 644
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 229 LSXPPSSPXRXPXXLPXPPAPXPPXPLPXP 318
L P SP R P P P P P P P P
Sbjct: 535 LPSPEPSPVREPTPPPPPREPTPREPTPEP 564
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
P +P S + P P P PPAP P +P P P
Sbjct: 143 PPMP-SGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMP 181
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
P +P S + P P P PPAP P +P P P
Sbjct: 143 PPMP-SGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMP 181
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 9.4
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +1
Query: 184 PXGRRSXXPXLPXSXLSXPPSS---PXRXPXXLPXPPAPXPPXPLPXPSXPXXLSLXP 348
P GR P +P PPS P P PP P +P P P S P
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 262 PXXLPXPPAPXPPXPLPXP 318
P P PP P PP P P P
Sbjct: 298 PAAAPPPPPPPPPPPAPAP 316
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 262 PXXLPXPPAPXPPXPLPXP 318
P P PP P PP P P P
Sbjct: 298 PAAAPPPPPPPPPPPAPAP 316
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 208 PXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLP 312
P P + PP P LP PAP PP P P
Sbjct: 121 PQCPPPPVPHPPQITQMAPI-LPTSPAPPPPIPHP 154
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 181 APXGRRSXXPXLPXSXLSXPPSSPXRXPXXLPXPPAPXPPXPLPXP 318
+P RR P P S PP +P P P P PP P+P P
Sbjct: 154 SPPPRRP--PMTPPSPQRRPPRTP---PSPEPRNPPRTPPSPIPPP 194
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 9.4
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +1
Query: 184 PXGRRSXXPXLPXSXLSXPPSS---PXRXPXXLPXPPAPXPPXPLPXPSXPXXLSLXP 348
P GR P +P PPS P P PP P +P P P S P
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 326 GXEGXGRGXGGXG-AGGXGXXXGXRXGEEGGXEXXEXGR 213
G G G G GG G GG G G R + GG GR
Sbjct: 216 GGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGR 254
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 326 GXEGXGRGXGGXGAGGXGXXXGXRXGE 246
G G GRG GG GG G G R E
Sbjct: 159 GNGGGGRGGGGGRGGGGGGGAGERIAE 185
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 238 PPSSPXRXPXXLPXPPAPXPPXPLPXPSXP 327
PPS P PP PP P P P P
Sbjct: 198 PPSKPADLSNTRSLPPVNNPPPPHPIPQFP 227
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 9.4
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -2
Query: 473 GXGGXXXGGXXXXXXXREGXXXGGXXXXXXXXXXXXXGXXRXGXSERXXGXEGXGRGXGG 294
G GG GG G GG G G G G G GG
Sbjct: 151 GYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGG-GGMGGYGGGMGGGGYGGGG 209
Query: 293 XGAGGXGXXXGXRXGEEGG 237
G GG G G GG
Sbjct: 210 MGGGGYGGGGDGGYGPSGG 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,525,020
Number of Sequences: 27780
Number of extensions: 218506
Number of successful extensions: 2371
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3599888010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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