Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_K17
         (984 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537864-1|CAD97867.1|  270|Homo sapiens hypothetical protein pr...    32   3.7  
AL158217-11|CAI22163.1|  854|Homo sapiens espin protein.               31   6.5  
AL035288-1|CAA22892.1|  671|Homo sapiens hypothetical protein pr...    31   6.5  
AL031848-3|CAI19773.1|  854|Homo sapiens espin protein.                31   6.5  
AL021920-3|CAI19632.1|  671|Homo sapiens espin pseudogene protein.     31   6.5  

>BX537864-1|CAD97867.1|  270|Homo sapiens hypothetical protein
           protein.
          Length = 270

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 622 PPPPPXXFXXLPPPXXKKKKK 684
           PPPPP     +PPP   KKKK
Sbjct: 249 PPPPPPPAPKMPPPEKTKKKK 269


>AL158217-11|CAI22163.1|  854|Homo sapiens espin protein.
          Length = 854

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 600 GXXKKKXPPPPPXXFFXPPPP 662
           G   K  PPPPP  F  PPPP
Sbjct: 423 GTIGKPTPPPPPPSFPPPPPP 443


>AL035288-1|CAA22892.1|  671|Homo sapiens hypothetical protein
           protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 600 GXXKKKXPPPPPXXFFXPPPP 662
           G   K  PPPPP  F  PPPP
Sbjct: 325 GTIGKPIPPPPPPSFPPPPPP 345


>AL031848-3|CAI19773.1|  854|Homo sapiens espin protein.
          Length = 854

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 600 GXXKKKXPPPPPXXFFXPPPP 662
           G   K  PPPPP  F  PPPP
Sbjct: 423 GTIGKPTPPPPPPSFPPPPPP 443


>AL021920-3|CAI19632.1|  671|Homo sapiens espin pseudogene protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 600 GXXKKKXPPPPPXXFFXPPPP 662
           G   K  PPPPP  F  PPPP
Sbjct: 325 GTIGKPIPPPPPPSFPPPPPP 345


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,312,496
Number of Sequences: 237096
Number of extensions: 1933810
Number of successful extensions: 10018
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8446
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13158340014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)