Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_K15
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0367 + 22399785-22399899,22400911-22401102,22401990-224021...    30   2.2  
12_02_0390 - 18510095-18510148,18510318-18512450,18513018-185136...    30   2.9  

>02_04_0367 +
           22399785-22399899,22400911-22401102,22401990-22402117,
           22402229-22402384,22402948-22403206,22403762-22403836,
           22404288-22404610,22405041-22405274,22405355-22405542,
           22405734-22405869,22405963-22406071,22406988-22407090,
           22407188-22407374,22407467-22407565,22407666-22407724,
           22408581-22408686,22408798-22408962
          Length = 877

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 86  SKMYFTKIVFIAIICIMIW 142
           SK++F ++VF+AI  IM+W
Sbjct: 596 SKLFFVQVVFVAISSIMVW 614


>12_02_0390 -
           18510095-18510148,18510318-18512450,18513018-18513681,
           18514089-18514202,18514835-18514979,18515274-18515331
          Length = 1055

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 148 SSPNHNANDGDKYYFCKIHFRNDLWALPESIKSNQNLKEFPIV 20
           S+  H +++ +K Y C  HF +  W   ES    QNLK   ++
Sbjct: 836 SNVPHRSSNLEKLYICGHHFTDIFWKGVESQDLFQNLKRLDLI 878


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,743,644
Number of Sequences: 37544
Number of extensions: 351230
Number of successful extensions: 564
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)