Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K13
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 33 0.34
U53181-4|AAO12438.1| 440|Caenorhabditis elegans Heavy chain, un... 29 3.2
U53181-3|AAM29688.1| 516|Caenorhabditis elegans Heavy chain, un... 29 3.2
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 29 3.2
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 29 3.2
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 29 3.2
Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 29 4.2
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 29 4.2
AF101319-3|AAC69355.1| 331|Caenorhabditis elegans Hypothetical ... 29 5.6
Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 28 7.4
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 28 7.4
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 28 7.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 7.4
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-15|CAA86420.1| 956|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 28 9.8
Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z46266-8|CAJ30221.1| 826|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-6|CAA86038.1| 956|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 9.8
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 28 9.8
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 115 CACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 270
CA + A ++LNY RT L+ +NC P TT + + A N + AP
Sbjct: 38 CATTCGACSNLNYTRTCLSD-GLKNCACVGEPTTTMLCNTIACNYPRGSEAP 88
>U53181-4|AAO12438.1| 440|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform e protein.
Length = 440
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 31 EFLKILICRLEGDLERLLTK*NFSLYLRCA 120
EF +I++C L+ L RLLTK N YL A
Sbjct: 62 EFARIIVCELKPTLARLLTK-NLPAYLLVA 90
>U53181-3|AAM29688.1| 516|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform c protein.
Length = 516
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 31 EFLKILICRLEGDLERLLTK*NFSLYLRCA 120
EF +I++C L+ L RLLTK N YL A
Sbjct: 138 EFARIIVCELKPTLARLLTK-NLPAYLLVA 166
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 31 EFLKILICRLEGDLERLLTK*NFSLYLRCA 120
EF +I++C L+ L RLLTK N YL A
Sbjct: 1459 EFARIIVCELKPTLARLLTK-NLPAYLLVA 1487
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 31 EFLKILICRLEGDLERLLTK*NFSLYLRCA 120
EF +I++C L+ L RLLTK N YL A
Sbjct: 1461 EFARIIVCELKPTLARLLTK-NLPAYLLVA 1489
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 31 EFLKILICRLEGDLERLLTK*NFSLYLRCA 120
EF +I++C L+ L RLLTK N YL A
Sbjct: 1461 EFARIIVCELKPTLARLLTK-NLPAYLLVA 1489
>Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical
protein Y70C5C.2 protein.
Length = 414
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Frame = +3
Query: 378 FPLNFRLIMAGNYVKIIYRNYNLALKLGS-TTNPSNERIAYGDG-------VXKHTELVS 533
FP+N+ I + NY+ +YN+ LK T+ N+ + DG + K++
Sbjct: 317 FPMNYNNITSCNYLLTTLGSYNVMLKFNKFYTDMKNDFVTLYDGDSTKSPVIAKYSGYYE 376
Query: 534 WKFITLWENNR--VYFKIHNT 590
W F + N V F+ ++T
Sbjct: 377 WPFFNVSTGNSMLVTFRSNST 397
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 468 TNPSNERIA---YGDGVXKHTELVSWKFITLWENNRVYFKIHNT--KYNQYLKMSTTTCN 632
TNPS +A G G T + KF L + R ++H T + N++++ N
Sbjct: 11 TNPSTSGLAPTTNGIGSPPPTASAATKFSILTKFLRRKNQVHTTTAQQNEFMQKYMPNGN 70
Query: 633 CNSRXRVVYGGNSADSTRGAMVLPXPP 713
N+ GG A S G+ + PP
Sbjct: 71 SNAVQPAATGGQPASSDGGSAIEVPPP 97
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 468 TNPSNERIA---YGDGVXKHTELVSWKFITLWENNRVYFKIHNT--KYNQYLKMSTTTCN 632
TNPS +A G G T + KF L + R ++H T + N++++ N
Sbjct: 11 TNPSTSGLAPTTNGIGSPPPTASAATKFSILTKFLRRKNQVHTTTAQQNEFMQKYMPNGN 70
Query: 633 CNSRXRVVYGGNSADSTRGAMVLPXPP 713
N+ GG A S G+ + PP
Sbjct: 71 SNAVQPAATGGQPASSDGGSAIEVPPP 97
>AF101319-3|AAC69355.1| 331|Caenorhabditis elegans Hypothetical
protein K08D9.5 protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 405 AGNYVKIIYRNYNLALKLGSTTNPSNERIAYGDGVXKHTELVSWKFITLWENNRVYFKIH 584
A +KII Y++ L T N ++ I D HT + + +FIT ++N V F ++
Sbjct: 57 ANTMIKIIQNEYSIDSLL-ETDNETSALIETLD--VSHTFIEAAEFITFLDSNDVLFPVN 113
Query: 585 NTKYNQ 602
Y Q
Sbjct: 114 YPTYTQ 119
>Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical
protein F36G9.15 protein.
Length = 109
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +3
Query: 567 VYFKIHNTKYNQYLKMSTTTCNCNSRXRVVYGGNSADSTRGAMVLPXPPSTKTTSWFFIY 746
+YF+ + +L + NC S+ + G + R A V P P K+
Sbjct: 6 IYFQSITLLFGPFLLLIVFIVNCQSKKKFKEDGRAKLVPRNAPVCPDPAKEKSAQTCPTA 65
Query: 747 QSPNSXNALE 776
Q+P + +E
Sbjct: 66 QTPPAKTPME 75
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 173 RPRGETVQQHPHRRLRQCCPSELGI*EPRQGLHHPEC 283
RP + V Q HRRL + PS + R G HHP C
Sbjct: 355 RPHRKNVIQRSHRRLLETGPS-VEENPMRSGEHHPLC 390
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 173 RPRGETVQQHPHRRLRQCCPSELGI*EPRQGLHHPEC 283
RP + V Q HRRL + PS + R G HHP C
Sbjct: 355 RPHRKNVIQRSHRRLLETGPS-VEENPMRSGEHHPLC 390
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 173 RPRGETVQQHPHRRLRQCCPSELGI*EPRQGLHHPEC 283
RP + V Q HRRL + PS + R G HHP C
Sbjct: 355 RPHRKNVIQRSHRRLLETGPS-VEENPMRSGEHHPLC 390
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -3
Query: 476 GIGCGTELQS--EVVVSVN-DLDIVSGHDESKV*WEVLSNNFLSVADPQLVAVLHGVPS 309
G GCG + +S +V +N D D+ ++E + EVL NN S LV+V +P+
Sbjct: 63 GCGCGRKKRSVDDVEGVINMDSDVECNNEELR---EVLENNMKSTPSDSLVSVRSNLPT 118
>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 563 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 622
Query: 181 RRNCT 195
RN T
Sbjct: 623 ARNLT 627
>Z46266-15|CAA86420.1| 956|Caenorhabditis elegans Hypothetical
protein ZK899.8f protein.
Length = 956
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 431 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 490
Query: 181 RRNCT 195
RN T
Sbjct: 491 ARNLT 495
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 523 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 582
Query: 181 RRNCT 195
RN T
Sbjct: 583 ARNLT 587
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 612 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 671
Query: 181 RRNCT 195
RN T
Sbjct: 672 ARNLT 676
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 734 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 793
Query: 181 RRNCT 195
RN T
Sbjct: 794 ARNLT 798
>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 645 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 704
Query: 181 RRNCT 195
RN T
Sbjct: 705 ARNLT 709
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 682 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 741
Query: 181 RRNCT 195
RN T
Sbjct: 742 ARNLT 746
>Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical
protein ZK899.8j protein.
Length = 790
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 265 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 324
Query: 181 RRNCT 195
RN T
Sbjct: 325 ARNLT 329
>Z46266-8|CAJ30221.1| 826|Caenorhabditis elegans Hypothetical
protein ZK899.8i protein.
Length = 826
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 301 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 360
Query: 181 RRNCT 195
RN T
Sbjct: 361 ARNLT 365
>Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical
protein ZK899.8g protein.
Length = 787
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 262 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 321
Query: 181 RRNCT 195
RN T
Sbjct: 322 ARNLT 326
>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 563 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 622
Query: 181 RRNCT 195
RN T
Sbjct: 623 ARNLT 627
>Z37979-6|CAA86038.1| 956|Caenorhabditis elegans Hypothetical
protein ZK899.8f protein.
Length = 956
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 431 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 490
Query: 181 RRNCT 195
RN T
Sbjct: 491 ARNLT 495
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 523 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 582
Query: 181 RRNCT 195
RN T
Sbjct: 583 ARNLT 587
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 612 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 671
Query: 181 RRNCT 195
RN T
Sbjct: 672 ARNLT 676
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 734 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 793
Query: 181 RRNCT 195
RN T
Sbjct: 794 ARNLT 798
>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 645 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 704
Query: 181 RRNCT 195
RN T
Sbjct: 705 ARNLT 709
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 682 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 741
Query: 181 RRNCT 195
RN T
Sbjct: 742 ARNLT 746
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 682 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 741
Query: 181 RRNCT 195
RN T
Sbjct: 742 ARNLT 746
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +1
Query: 160 TLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAPXXXXXXXXXXXXXDGTPWSTATS 339
T + TS TTA+S +T S + + + + T ST S
Sbjct: 182 TTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTES 241
Query: 340 CGSATDRKLLESTSH*TLDSSWPET 414
++TD ESTS T DS+ E+
Sbjct: 242 TSTSTDSTTTESTSTST-DSTTTES 265
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 QLPXHYREFLKILICRLEGDLERLL--TK*NFSLYLRCACSPPARASL-NYPRTLLTKTS 180
QLP + R+ L CRLE L T + S++LR C SL N + T+
Sbjct: 612 QLPKNLRDVFSALRCRLEAQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTN 671
Query: 181 RRNCT 195
RN T
Sbjct: 672 ARNLT 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,905,506
Number of Sequences: 27780
Number of extensions: 335905
Number of successful extensions: 1170
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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