Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K11
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 59 5e-09
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 58 6e-09
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 39 0.005
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 33 0.27
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.82
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.82
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.82
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 5.8
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 7.6
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 7.6
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 7.6
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 75.4 bits (177), Expect = 5e-14
Identities = 53/154 (34%), Positives = 80/154 (51%)
Frame = +3
Query: 78 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 257
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 258 KVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNK 437
LL + +I ++ S A QW +++ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 438 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITL 539
+ VE+ K++L L+VLD L+ +T+LV ER++L
Sbjct: 104 KTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSL 137
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 538 LADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLXVAHQPQVSAVVGSLTLCAXPPTYXP 717
LADV V LL AFQ+VL + R S++NV RWF V +QP V V+G ++L + +
Sbjct: 137 LADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQ 196
Query: 718 KKYQELA 738
K+ EL+
Sbjct: 197 AKFTELS 203
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 538 LADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLXVAHQPQVSAVVGSLTLCAXPPTYXP 717
LADV V LL AFQ+VL + R S++NV RWF V +QP V V+G ++L + +
Sbjct: 112 LADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQ 171
Query: 718 KKYQELA 738
K+ EL+
Sbjct: 172 AKFTELS 178
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/89 (32%), Positives = 50/89 (56%)
Frame = +3
Query: 273 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 452
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 453 AKSDLLAALKVLDGHLLTRTFLVTERITL 539
K++L L+VLD L+ +T+LV ER++L
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSL 112
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 58.4 bits (135), Expect = 6e-09
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +3
Query: 78 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 257
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 258 KVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNK 437
LL + +I ++ S A QW +++ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 438 QNVERAKSDLLAALK-VLDGH 497
+ VE+ K++L L+ VLD +
Sbjct: 104 KTVEQYKNELNGQLQYVLDAN 124
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 580 QHVLXPSVRSSLINVQRWFLXVAHQPQVSAVVGSLTLCAXPPTYXPKKYQELA 738
Q+VL + R S++NV RWF V +QP V V+G ++L + + K+ EL+
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS 170
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 69 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFE 245
MA +LY+Y + A++ IA D + P +F E +K+ +F+K PA KVP
Sbjct: 1 MAKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL- 59
Query: 246 SADGKVLLTESNAIAYYV 299
+ LTES AI Y+
Sbjct: 60 -VINGLSLTESLAIIEYL 76
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 535 HLADVIVFS-TLLHAFQHVLXPSVRSSLINVQRWFLXVAHQPQVSAVVGSLTLCAXPPTY 711
H A + F ++ H L PS+ ++L +V RW L A P V GSL L
Sbjct: 68 HEASCVTFERVVVQNILHGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKK 127
Query: 712 XPKKYQEL 735
P Q++
Sbjct: 128 LPTSLQKI 135
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 535 HLADVIVFS-TLLHAFQHVLXPSVRSSLINVQRWFLXVAHQPQVSAVVGSLTLCAXPPTY 711
H A + F ++ H L PS+ ++L +V RW L A P V GSL L
Sbjct: 68 HEASCVTFERVVVQNILHGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKK 127
Query: 712 XPKKYQEL 735
P Q++
Sbjct: 128 LPTSLQKI 135
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 162 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 341
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 342 RVWQ 353
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 162 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 341
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 342 RVWQ 353
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 162 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 341
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 342 RVWQ 353
++WQ
Sbjct: 1085 QIWQ 1088
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 312 DFHWQRSKRWHCFQLGAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 163
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 303 WQRSKRWHCFQLGAPFHRHFRMQALFRQETSSRSLRTCWSRQIRNSV 163
W+R +R H ++G+ RHF+ + + SL CW R + V
Sbjct: 304 WKRYQRKH--KMGSEETRHFKGSSSLSNMNAQSSLMVCWKRSTDDRV 348
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 96 PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 257
P FR Y AAQ + VK P+ V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 258 KVLLTESNAIAYYV 299
K L+ ES I Y+
Sbjct: 84 KKLVIESAVIPEYL 97
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 218 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 87
K+LQ +FG + L+ CY + + CG++ F S++VF++ V
Sbjct: 22 KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 360 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 479
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -2
Query: 356 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*EHLSIGT-FECRHFSGRKLLQEVFGLVG 186
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 185 LAKYEIR 165
L ++EIR
Sbjct: 569 LQQHEIR 575
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 192 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 299
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 192 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 299
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 204 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 299
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 402 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 530
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,755,192
Number of Sequences: 27780
Number of extensions: 424935
Number of successful extensions: 1219
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -