Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_K10
         (846 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333...    29   3.5  
07_01_1214 - 11583510-11583653,11585063-11585148,11585234-115853...    29   4.7  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   4.7  

>08_02_1322 +
           26131395-26131599,26132382-26132468,26133119-26133372,
           26133430-26133526,26133613-26133693,26133782-26133976,
           26134093-26134182,26134296-26134471,26134565-26134687,
           26134799-26134945,26135027-26135163,26135247-26135364,
           26135462-26135518
          Length = 588

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 453 KIYLGDHEVLQGLDLALTLMYRGEECILHLLPD 551
           K  LG  +V++G DL +  M +GE  +  + PD
Sbjct: 92  KFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPD 124


>07_01_1214 -
           11583510-11583653,11585063-11585148,11585234-11585316,
           11585415-11585572,11587083-11587243,11588058-11588279,
           11588553-11588677,11589538-11589656,11589961-11590020,
           11590292-11590370,11591936-11592100,11592632-11592660,
           11593439-11593500,11594724-11594859,11594999-11595161,
           11595245-11595384,11597811-11597899,11598914-11599001,
           11599558-11599658,11599711-11599859,11600769-11600870,
           11601888-11601973,11602064-11602309
          Length = 930

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
 Frame = -1

Query: 426 CYCLLFEFIADSAYVPSLWSGSRYFI-PLFQYL-FKQSSGPKNILPFVI------LYFWG 271
           CYCL F F      +PS W   R F  P   +L F  +S     +P +I       +FWG
Sbjct: 496 CYCLGFSFTPSIPNIPSAWVLRRGFAHPYLAFLMFVPTSLAGLFIPRIIWGLSEQAHFWG 555

Query: 270 FF 265
            F
Sbjct: 556 AF 557


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 735 PXIPP*SPAGNRVGSGPXINPPPXRGATFXXXKPPP 842
           P  PP  P    +G  P I PPP  G T     PPP
Sbjct: 277 PQAPPPPPPNAPMGMPPRIPPPPV-GGTQPPPPPPP 311


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,742,725
Number of Sequences: 37544
Number of extensions: 392720
Number of successful extensions: 787
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)