Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_K08
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.88 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   6.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   6.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   6.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   6.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.2  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 541 YLGVNCEGIVNLSVRNGT 594
           YLG+ C+G+ ++  RN T
Sbjct: 9   YLGITCQGVTDIHSRNLT 26


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 618 CPCXQX-EXPRAAAGTSSNSCPTTKTRTALLGNYL 719
           CP  Q  E P  ++ T++ S P T T++ ++ N+L
Sbjct: 312 CPMLQKLEKPVLSSSTTTTS-PMTSTKSTIVRNHL 345


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 692 GLGRWAAVAGGTRCCPG 642
           G G+W   +GG  C PG
Sbjct: 236 GDGKWYLPSGGCHCKPG 252


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 647 PGXLXLGARTL-FWCXWSTVPLRTL 576
           PG + + +  + FW  W+ VP R +
Sbjct: 310 PGIILVTSSFITFWLEWNAVPARVM 334


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 647 PGXLXLGARTL-FWCXWSTVPLRTL 576
           PG + + +  + FW  W+ VP R +
Sbjct: 279 PGIILVTSSFITFWLEWNAVPARVM 303


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 647 PGXLXLGARTL-FWCXWSTVPLRTL 576
           PG + + +  + FW  W+ VP R +
Sbjct: 330 PGIILVTSSFITFWLEWNAVPARVM 354


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 647 PGXLXLGARTL-FWCXWSTVPLRTL 576
           PG + + +  + FW  W+ VP R +
Sbjct: 279 PGIILVTSSFITFWLEWNAVPARVM 303


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 544 LGVNCEGIVNLSVRNGT 594
           LG+ C+GI +++VR  +
Sbjct: 11  LGIACQGITSVTVRENS 27


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 720 LTEXKPGKVIKVVAKNRTG 776
           L + KPG +I+ +A  R+G
Sbjct: 385 LGDIKPGSIIENIAHTRSG 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,967
Number of Sequences: 438
Number of extensions: 5137
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)