Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K07
(925 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.033
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.057
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.23
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 31 0.30
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.6
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 8.6
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.033
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 863 PXXPPPPPXXXXXPPXPPPPP 925
P PPPPP P PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 33.9 bits (74), Expect = 0.033
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 863 PXXPPPPPXXXXXPPXPPPPP 925
P PPPP PP PPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 830 PXLLFXXSPXXPXXPPPPPXXXXXPPXPPPPP 925
P ++ P PPP PP PPPPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 830 PXLLFXXSPXXPXXPPPPPXXXXXPPXPPPPP 925
P + +P P PPP P PPPPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 665 GAXXPXPXPPPPPPPXXXGGG 727
G P PPPPPPP GG
Sbjct: 769 GVAGAGPPPPPPPPPAVSAGG 789
Score = 29.1 bits (62), Expect = 0.93
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 689 PPPPPPPXXXGGGGXXXP 742
PPPPPPP G G P
Sbjct: 761 PPPPPPPPGVAGAGPPPP 778
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 689 PPPPPPPXXXGGGGXXXP 742
PPPPPPP G G P
Sbjct: 762 PPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 662 GGAXXPXPXPPPPPPPXXXGGGGXXXP 742
G A P PPPPPP GG P
Sbjct: 769 GVAGAGPPPPPPPPPAVSAGGSRYYAP 795
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.057
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 854 PXXPXXPPPPPXXXXXPPXPPPPP 925
P P PPPPP PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 32.7 bits (71), Expect = 0.075
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 854 PXXPXXPPPPPXXXXXPPXPPPPP 925
P PPPPP P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 668 AXXPXPXPPPPPPP 709
A P PPPPPPP
Sbjct: 2 ASLPPGNPPPPPPP 15
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 798 PPPPXPXXXXHPXFFFXXXPXXPPXPPPPXXPXXXXLSXPXP 923
P PP P P P PP PPP P S P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +2
Query: 803 PPXXXXXXTPXLLFXXSPXXPXX--PPPP--PXXXXXPPXPPPPP 925
PP P + +P P PPPP P PP PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +2
Query: 788 PXXXXPPXXXXXXTPXLLFXXSPXXPXXPPPPPXXXXXPPXPP--PPP 925
P P P + P P PPPP P PP PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/91 (24%), Positives = 23/91 (25%)
Frame = +1
Query: 613 PPPXPKXKKXKXXKXXXGXXXPXSXXPPXPPPXXXGGGGXXXSXXXXXXXXXPXXXXXPX 792
PPP P + K G S PP PPP G P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG--------SIPLPPQGRSAPP 362
Query: 793 XXXPPPXXXXXXTPPSFFXFXXXXXXPPPPP 885
P PP P PPP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.5 bits (63), Expect = 0.70
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 689 PPPPPPPXXXGGGGXXXPXXXXXXXPPXXXXXXPXXXXPPXXXXXXTPXLLFXXSPXXPX 868
PPPPPPP G PP PP P
Sbjct: 311 PPPPPPPSRRNRG-----------KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRS 359
Query: 869 XPPPPPXXXXXPPXPPPPP 925
PPPPP PPP
Sbjct: 360 APPPPPPRSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 12/90 (13%)
Frame = +2
Query: 692 PPPPPPXXXGGGGXXXPXXXXXXXPPXXXXXXPXXXXP--PXXXXXXTPXLLFXXSPXXP 865
PP PPP G P P P P P L +P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 866 XXPP-----PP-----PXXXXXPPXPPPPP 925
PP PP P PP P PP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 689 PPPPPPPXXXGGGGXXXPXXXXXXXPPXXXXXXPXXXXPPXXXXXXTPXLLFXXSPXXPX 868
PP P PP P PP P P P P
Sbjct: 415 PPVPTPPSLPPSA----PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL-----PAGMPA 465
Query: 869 XPPPPPXXXXXPPXPPPPP 925
PP PP PP P P P
Sbjct: 466 APPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 851 SPXXPXXPPPPPXXXXXPPXPPPPP 925
+P P PPP PP PP P
Sbjct: 250 APAPPPIPPPSNGTVSSPPNSPPRP 274
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 665 GAXXPXPXPPPPPPPXXXGGGG 730
G P PPPPPPP GG
Sbjct: 939 GVMPAFPPPPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect(2) = 0.44
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 683 PXPPPPPPPXXXGGGGXXXP 742
P PPPPPP GG P
Sbjct: 946 PPPPPPPPLVSAAGGKFVSP 965
Score = 21.8 bits (44), Expect(2) = 0.44
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 677 PXPXPPPPPP 706
P P PPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 677 PXPXPPPPPPP 709
P P PPPPPPP
Sbjct: 234 PLPAPPPPPPP 244
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 683 PXPPPPPPP 709
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/85 (23%), Positives = 21/85 (24%), Gaps = 1/85 (1%)
Frame = +2
Query: 668 AXXPXPXPPPPPPPXXXGGGGXXXPXXXXXXXPPXXXXXXPXXXXPPXXXXXXTPXLLFX 847
A P P P PP P P P P P +
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 848 XSP-XXPXXPPPPPXXXXXPPXPPP 919
P PP P PP PPP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/85 (23%), Positives = 21/85 (24%), Gaps = 1/85 (1%)
Frame = +2
Query: 668 AXXPXPXPPPPPPPXXXGGGGXXXPXXXXXXXP-PXXXXXXPXXXXPPXXXXXXTPXLLF 844
A P P P PP P P P P P P +
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 845 XXSPXXPXXPPPPPXXXXXPPXPPP 919
P PP P PP P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +2
Query: 677 PXPXPPPPPPPXXXGGGGXXXPXXXXXXXPPXXXXXXPXXXXPPXXXXXXTPXLLFXXSP 856
P P P PP G P P P PP P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPP----VPAPSSGIPPVPK----PAAGVPPVP 1192
Query: 857 XXPXXPPPPPXXXXXPPXPPP 919
PP P PP PPP
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPP 1213
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 851 SPXXPXXPPPPPXXXXXPPXPPPPP 925
+P PPPPP P PP P
Sbjct: 737 TPAVKHHPPPPPVRSSISPSMPPAP 761
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 683 PXPPPPPPP 709
P PPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +2
Query: 683 PXPPPPPPPXXXGGGGXXXPXXXXXXXPPXXXXXXPXXXXPPXXXXXXTPXLLFXXSPXX 862
P P PP P P P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 863 PXXPPPPPXXXXXPPXPPPPP 925
P P P PP PPPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPP 205
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 924 GGGGGXGGXXXXXGG-GGGXXGXXG 853
G GGG GG GG GGG G G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 924 GGGGGXGGXXXXXGG-GGGXXGXXG 853
G GGG GG GG GGG G G
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGG 263
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 872 PPPPPXXXXXPPXPPPP 922
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 741 GXXXPPPPXXXGGGGGGGXGXGXXAP 664
G PPPP GG G G G P
Sbjct: 72 GNAAPPPPGAEGGPGAGFGGFPGAGP 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,842,167
Number of Sequences: 5004
Number of extensions: 26487
Number of successful extensions: 359
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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