Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_K01
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0436 + 21226656-21226695,21226819-21226934,21227059-212272... 102 3e-22
02_01_0124 + 901034-901153,901455-901481,901713-901792,903739-90... 84 1e-16
10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601 58 7e-09
11_04_0094 + 13418604-13418680,13419331-13419400,13420078-134202... 49 4e-06
02_05_1270 + 35360375-35360494,35361361-35361519,35361611-353617... 49 4e-06
01_06_1783 + 39845998-39846174,39846260-39846534,39846758-398468... 48 1e-05
06_03_1505 + 30635572-30635802,30636977-30637135,30637217-306373... 47 2e-05
11_06_0762 + 27043460-27044319,27052096-27052912,27052992-270536... 30 2.7
08_02_1625 + 28336168-28336409,28336491-28336564,28337162-283372... 29 4.8
01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739... 29 4.8
12_02_0352 - 17862577-17863528,17864076-17864827 29 6.3
04_04_0980 - 29868501-29868773,29868862-29869077,29869443-29869673 28 8.3
>05_04_0436 +
21226656-21226695,21226819-21226934,21227059-21227210,
21227309-21227394,21227999-21228126,21228267-21228317,
21228574-21228660,21229418-21229487,21230334-21230470,
21230855-21230932,21231912-21231998
Length = 343
Score = 102 bits (245), Expect = 3e-22
Identities = 57/100 (57%), Positives = 69/100 (69%), Gaps = 3/100 (3%)
Frame = +1
Query: 31 EFLNYLTW*PGCILLCGLFLYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLVNGLNASN 210
E L+ ++ G ILL GLF YDIFWVF T VMV+VAKSF+APIKL+FP G A
Sbjct: 177 EMLSLGSFKTGAILLSGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFP-----TGDAARP 231
Query: 211 FAMLGLGDIVVPGIFIALLLRFDKSLKRNSEFY---FRGY 321
F+MLGLGDIV+PGIF+AL LRFD S + ++ F GY
Sbjct: 232 FSMLGLGDIVIPGIFVALALRFDVSRGIKNRYFNSAFLGY 271
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 287 SNGTLSFTSGATFSAYILGLLATILVMHVFKHAQPALLYXXXXXXXXXXXXXXXRGDLPA 466
S G + + F Y +GL TI+VM+ F+ AQPALLY G++
Sbjct: 256 SRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVPGVIGFVAVHCLWNGEVKP 315
Query: 467 LFKYED 484
L +Y +
Sbjct: 316 LLEYNE 321
>02_01_0124 +
901034-901153,901455-901481,901713-901792,903739-903811,
904015-904072,904561-904615,905140-905164,905361-905421,
907416-907531,907661-907812,907918-908003,908182-908309,
908451-908501,908774-908860,908964-909033,909351-909407,
909729-909865,910313-910390,910971-911057
Length = 515
Score = 84.2 bits (199), Expect = 1e-16
Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 22/119 (18%)
Frame = +1
Query: 31 EFLNYLTW*PGCILLCGLFLYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLVNGLNASN 210
E L+ ++ G ILL GLF YDIFWVF T VMV+VAKSF+APIKL+FP G A
Sbjct: 330 EMLSLGSFKTGAILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFP-----TGDAARP 384
Query: 211 FAMLGLGDIVVP-------------------GIFIALLLRFDKSLKRNSEFY---FRGY 321
F+MLGLGDIV+P GIF+AL LRFD S + ++ F GY
Sbjct: 385 FSMLGLGDIVIPDECNKISFKVRTTWLLYNEGIFVALALRFDVSRGIKNRYFNSAFLGY 443
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 287 SNGTLSFTSGATFSAYILGLLATILVMHVFKHAQPALLYXXXXXXXXXXXXXXXRGDLPA 466
S G + + F Y +GL TI+VM+ F+ AQPALLY G++
Sbjct: 428 SRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVPGVIGFVAVHCLWNGEVKP 487
Query: 467 LFKYED 484
L +Y +
Sbjct: 488 LLEYNE 493
>10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601
Length = 371
Score = 58.4 bits (135), Expect = 7e-09
Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 33/104 (31%)
Frame = +1
Query: 67 ILLCGLFLYDIFWVF------GTNVMVTVA------------------------KSFEAP 156
+LL LF+YD+FWVF G NVMV+VA K E P
Sbjct: 177 LLLVCLFVYDVFWVFFSERFFGANVMVSVATQKASNPVHTVANKLSLPGLQLITKKLELP 236
Query: 157 IKLVFPQDL---LVNGLNASNFAMLGLGDIVVPGIFIALLLRFD 279
+KLVFP+ L L G + ++ MLGLGD+ +PG+ +AL+L FD
Sbjct: 237 VKLVFPRSLMGGLAPGSSPGDYMMLGLGDMAIPGMLLALVLSFD 280
>11_04_0094 +
13418604-13418680,13419331-13419400,13420078-13420236,
13420334-13420445,13420530-13420649,13422249-13422406,
13422987-13423217,13424621-13424713,13425088-13425227,
13426331-13426401,13427554-13427637,13427752-13427846
Length = 469
Score = 49.2 bits (112), Expect = 4e-06
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 70 LLCGLFLYDIFWVFGT------NVMVTVAK---SFEA-PIKLVFPQDLLVNGLNASNFAM 219
LL F+YD+FWVF + +VM+ VA+ S EA P+ L P+ G + M
Sbjct: 314 LLSAAFVYDVFWVFISPLIFHESVMIAVARGDNSGEAIPMLLRIPRFFDPWG----GYDM 369
Query: 220 LGLGDIVVPGIFIALLLRFDKSLKRNSEFYFRGY 321
+G GDI+ PG+ +A RFD++ KR F GY
Sbjct: 370 IGFGDIIFPGLLVAFSYRFDRASKRG---LFNGY 400
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 332 YILGLLATILVMHVFK-HAQPALLYXXXXXXXXXXXXXXXRGDLPALFKY 478
Y +GL T L + + H QPALLY RG+L L+ Y
Sbjct: 408 YAVGLFLTYLALFLMDGHGQPALLYLVPCTLGLIVILGWFRGELHDLWNY 457
>02_05_1270 +
35360375-35360494,35361361-35361519,35361611-35361722,
35362306-35362422,35362570-35362721,35362804-35362986,
35363627-35363661,35363809-35363965,35364052-35364105,
35364196-35364288,35364373-35364515,35364753-35364823,
35365234-35365317,35365408-35365532,35366918-35366938
Length = 541
Score = 49.2 bits (112), Expect = 4e-06
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%)
Frame = +1
Query: 61 GCILLCGLFLYDIFWVFGT------NVMVTVAKSFEA-----PIKLVFPQDLLVNGLNAS 207
G +LL FLYDIFWVF + +VM+ VA+ + P+ L P+ G
Sbjct: 365 GSVLLSCSFLYDIFWVFISKMWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWG---- 420
Query: 208 NFAMLGLGDIVVPGIFIALLLRFDKSLKR 294
F+++G GDI++PG+ IA LR+D + K+
Sbjct: 421 GFSIIGFGDILLPGLLIAFALRYDWAAKK 449
>01_06_1783 +
39845998-39846174,39846260-39846534,39846758-39846891,
39846992-39847116,39847312-39847494,39847610-39847644,
39847756-39847912,39847936-39848049,39848143-39848235,
39848316-39848455,39848606-39848676,39848759-39848839,
39851475-39851954,39852110-39852387,39853346-39854143
Length = 1046
Score = 48.0 bits (109), Expect = 1e-05
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = +1
Query: 70 LLCGLFLYDIFWVFGT------NVMVTVAK-SFEAP-IKLVFPQDLLVNGLNASNFAMLG 225
LL F+YDIFWVF + +VM+TVA+ S E P + +V + N + M+G
Sbjct: 405 LLVSAFMYDIFWVFISPFIFKKSVMITVARGSDEGPSLPMVLKMPKEFDTWNG--YDMIG 462
Query: 226 LGDIVVPGIFIALLLRFDKS 285
GDI+ PG+ +A R+D++
Sbjct: 463 FGDILFPGLLVAFSFRYDRA 482
>06_03_1505 +
30635572-30635802,30636977-30637135,30637217-30637328,
30638004-30638123,30638264-30638415,30638938-30638972,
30639077-30639233,30639328-30639381,30639502-30639594,
30639685-30639827,30639939-30640009,30640323-30640453
Length = 485
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Frame = +1
Query: 61 GCILLCGLFLYDIFWVFGT------NVMVTVAKSFEA-----PIKLVFPQDLLVNGLNAS 207
G +LL F YDIFWVF + +VM+ VA+ + P+ L P+ G
Sbjct: 342 GSVLLSCAFFYDIFWVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWG---- 397
Query: 208 NFAMLGLGDIVVPGIFIALLLRFDKSLKRN 297
++++G GDI++PG+ +A LR+D + K++
Sbjct: 398 GYSIIGFGDILLPGLLVAFALRYDWAAKKS 427
>11_06_0762 +
27043460-27044319,27052096-27052912,27052992-27053649,
27053698-27053934,27054091-27054161,27054346-27054441
Length = 912
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 234 VTQPQHGKVARVQTVYQQILRKHQFDRSLEALGDGHHDVGTEHPEDV-VQEESAEQDA 64
VT H KV V+ + + +KH ++ + DG T D QEE AE +A
Sbjct: 819 VTIRLHDKVHSVEAALRHLTKKHPRRPTITLIRDGEEPTDTAASNDTRTQEELAEMEA 876
>08_02_1625 +
28336168-28336409,28336491-28336564,28337162-28337236,
28337433-28337459,28339261-28339634,28339746-28340492
Length = 512
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 196 LNASNFAMLGLGDIVVPGIFIALLLRFDKSLKRNSEFYFRGYVQRVHPGPVG 351
L+ +NFA G+G + GI A ++R +K L+ YF Y RV G +G
Sbjct: 244 LHGANFASAGVGILNDTGIQFANIIRIEKQLR-----YFNQYQDRVR-GLIG 289
>01_05_0655 -
23972488-23973152,23973193-23973241,23973883-23973940,
23974184-23974215,23975961-23976040,23976509-23977898
Length = 757
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 156 RSLEALGDGHHDVGTEHPEDVVQEESAEQDAAGSP 52
R +E +G GH TE E+ V+ S E+ + G+P
Sbjct: 717 RMIEEIGGGHGRTTTEESEEGVRGTSEEERSRGTP 751
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 448 EERQGQWGGEAGGHEVQQRGLRVLEHVHHQDGRQQAQDV 332
E+ G+ G + GH Q R L V++ G Q QDV
Sbjct: 382 EDDDGEKHGGSYGHHHQSRALEVIDEEERDGGACQLQDV 420
>04_04_0980 - 29868501-29868773,29868862-29869077,29869443-29869673
Length = 239
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 786 CHLGCXISETSG--FGRXSNAGFGVKXT 709
C LGC I TSG GR +AG G+K T
Sbjct: 144 CSLGCKIVGTSGDYRGRKRHAGGGIKKT 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,042,438
Number of Sequences: 37544
Number of extensions: 337880
Number of successful extensions: 987
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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