Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_J20
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 30 0.37
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 30 0.37
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.37
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 29 0.86
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.5
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 3.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 3.5
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 26 6.1
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 325 TASGMSFLKSPETASQGDVSKKHPIKAFRESI 230
++ G+ FL SPE A+Q +S+KH A +S+
Sbjct: 112 SSRGVHFLDSPELANQCGLSRKHIFDAVEDSV 143
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 30.3 bits (65), Expect = 0.37
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 285 AVSGDFKKDIPEAVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDP 443
A S FK DI E + ++ A HL+ R E ++ KLP+E E F K++P
Sbjct: 106 AYSVVFKDDISEEMLKS------ALNHLYDRMTEALRFKLPEEDEVF-DKHEP 151
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.37
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 645 PXXPPXXRGPXXXPXXAXXPXXXPXXXGXVPXXPPXXXXXFXXGGPRPXPPP 800
P PP P P P P G P PP GP P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP---PGVAGAGPPPPPPP 781
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 29.1 bits (62), Expect = 0.86
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 156 FAAVYCKETYSSENDDLDIEALVGNID-SLKAFIGCFLETSPCDAVSGDFKKDIPEAVAE 332
F + + Y ++ND + +ID S+K+F C E + + GD +D A +
Sbjct: 29 FVEKFAESLYETQNDG---SKKLSSIDGSIKSFAACLHELNRLKSRVGDRIRDYASASKQ 85
Query: 333 ACGKCTPAQKHLFKRFLEVVK 395
+ HL ++F +V++
Sbjct: 86 VQNEYHQKSNHLREKFAQVLE 106
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 799 GGGXGRGPPXXKXXXFXGGXXGTXPXXXGXXXGXXAXXGXXXGPRXXGGXXGPG 638
GGG G PP GG G G G GP GG GPG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG--GPG 245
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 753 FXGGSXXXXPXXGGXGGXAGXXXGXXXXXXXKGGXXGPG 637
F GGS P GG GG G G GPG
Sbjct: 193 FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 TIIQDEGFLRCCVLHCSLLSTVKR 180
T+ QDE R C L C++LS V R
Sbjct: 367 TLNQDEAVARGCALSCAILSPVFR 390
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 3.5
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Frame = +3
Query: 147 FALFAAVYCKETYS--SENDDLDIEALVGNIDSLKAFIGCFL-----ETSPCDAVSGDFK 305
F+ FA ET S SE + + N D + + FL T C V K
Sbjct: 1244 FSEFAKRVNTETLSLISEWCASSLSLIKANYDEFSSTVDDFLFRFSKATEQCLMVKY-IK 1302
Query: 306 KDIPEAVAEACGKCTPAQK-HLFKRFLEVVKDKLPQEYEAFKTKY 437
KD+ + E+C ++ HL+K+F +V+ L E T++
Sbjct: 1303 KDLEIEIEESCDFSIQTEEIHLYKKFKDVISSNLEFIVEIKNTRW 1347
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 FAAVYCKETYSSENDDL-DIEALVGNIDSLKAFIGCFL 266
F Y K+ SS N DL ++ G + AFI CFL
Sbjct: 433 FHEAYLKQLTSSSNADLCNVSRAGGGCCTAAAFIKCFL 470
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,655,703
Number of Sequences: 5004
Number of extensions: 49876
Number of successful extensions: 179
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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