Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_J18
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 29 3.5
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 29 3.5
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 29 3.5
11_03_0063 + 9515666-9516656,9517503-9518599 29 4.6
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 29 4.6
08_02_0005 + 11190901-11191896 29 4.6
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 4.6
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 4.6
01_01_0100 - 755894-756662,757086-757598,758718-761050 29 4.6
10_08_0226 - 16001958-16002527 29 6.1
09_02_0181 - 5425833-5426527,5426667-5429397 29 6.1
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 8.1
09_03_0007 - 11430123-11430513,11430605-11430794,11431114-114311... 28 8.1
05_03_0164 - 9078814-9079908 28 8.1
04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798 28 8.1
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -1
Query: 366 KTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLS 223
K+L P A PVSLP +K SL P P +P S P V K+LPPP +S
Sbjct: 1262 KSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 194 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 370
SR H TW KQ GGK G G G G G R + TG Q YG V
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443
Query: 371 P--GGDSTNYGG 400
P G T +GG
Sbjct: 444 PTCSGGHTGFGG 455
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 194 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 370
SR H TW KQ GGK G G G G G R + TG Q YG V
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443
Query: 371 P--GGDSTNYGG 400
P G T +GG
Sbjct: 444 PTCSGGHTGFGG 455
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 LKILTFGPEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 169
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 485 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 530
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 LKILTFGPEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 169
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 542 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 587
>08_02_0005 + 11190901-11191896
Length = 331
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 LKILTFGPEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 169
L++ PEER N +L N + +YI + + C+ + + P+ Y +
Sbjct: 90 LEVPNLEPEERINEYELSENIDNYYISNSNIECIGLQAFAPNWYRD 135
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 383 STNYGGRLDWANKNAQATIDLNRQI 457
S+ +GG L W N + ++T+D +RQ+
Sbjct: 960 SSLHGGSLPWKNTDFESTVDFDRQL 984
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 LKILTFGPEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 169
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 259 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 304
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 LKILTFGPEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 169
L++ PEER N +L N + +YI + + C+ + + P+ Y +
Sbjct: 822 LEVPNLEPEERINEYELSENIDNYYISNSNIECIGLQAFAPNWYRD 867
>10_08_0226 - 16001958-16002527
Length = 189
Score = 28.7 bits (61), Expect = 6.1
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +2
Query: 236 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGQA-YGTRVLGPGGDSTNYGGRLDW 412
G G G++ Q G G + G + G YGT G + GG
Sbjct: 91 GQGSSSGSVSQGG-GSASAGGGGGGVAGGQAGGVDGSGGYGTGTGSGTGSAAADGGASPT 149
Query: 413 ANK---NAQATIDLNRQIGGRSGMTASGSG 493
++ NA AT D N GG+SG + SG G
Sbjct: 150 SSPPYANANATGDGNGNGGGQSGGSGSGGG 179
>09_02_0181 - 5425833-5426527,5426667-5429397
Length = 1141
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +2
Query: 188 QSSRRHPRDVTWDKQMGGGKVFGTLGQN-DDGLFGKAGYNREIFNDDRGKLTGQAYGTRV 364
QS RR + W K++GG + +N DDG G + G + T
Sbjct: 959 QSRRRAEKAAAWPKRLGGTGPCASRTENADDGAAGGGDGGSTWGGGSGAPMAGSGFPTHG 1018
Query: 365 LGPGGDSTNYGG 400
G G+ + GG
Sbjct: 1019 SGRRGERRDGGG 1030
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 236 GGGKVFG-TLGQNDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDS-TNYGGRLD 409
G G G T+G +DDG K + + + G+ G A G R G GG N+G R D
Sbjct: 177 GAGAAHGKTIGLDDDGEEDKMDEDAKTPSKAAGRGRGGASGGRGRGGGGRGFMNFGERKD 236
Query: 410 WANK 421
+K
Sbjct: 237 PPHK 240
>09_03_0007 -
11430123-11430513,11430605-11430794,11431114-11431182,
11431601-11431727,11431843-11432083,11432519-11432596,
11433004-11433109,11433560-11433625,11437021-11437043,
11438106-11438177,11438256-11438394,11439505-11439919
Length = 638
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 152 PSDYAEDYSISGQSSRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRG 331
PS +A D I +S PR ++ D + + G + N L N + N G
Sbjct: 162 PSQFAWDGVICRNTSDNIPRIISLD--LSNSNLHGVISNNFTLLTALENLNNFVPNIAVG 219
Query: 332 KLTGQ---AYGTRVLGPGGDSTNYGGRLDW 412
K+ + G GGDS N +LDW
Sbjct: 220 KVKKDDMVSKGEVKKVKGGDSQNLDEKLDW 249
>05_03_0164 - 9078814-9079908
Length = 364
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 362 VLGPGGDSTNYGGRLDWANKNAQATIDLNRQIGGRSGMTASGSGVWDLDKNTHFSAGGMV 541
V+G G +++ LD+ + A A + NR+ G ++ G + L N H S G
Sbjct: 85 VVGDAGATSDGLLLLDFTDIRATARVVANRRAGAQAQAQQQGKKLTGLSFNLHNSRGDTQ 144
Query: 542 SKEFG--HKRPDV 574
+E + PD+
Sbjct: 145 ERELAGVNTNPDI 157
>04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798
Length = 575
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 LKILTFGPEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 169
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 469 LEALNLECEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 514
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,716,592
Number of Sequences: 37544
Number of extensions: 568395
Number of successful extensions: 2977
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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