Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J14
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666...   313   1e-85
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    30   2.7  
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414...    29   3.6  
09_06_0081 + 20745627-20748144,20748211-20748308                       29   4.7  
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159...    29   4.7  
12_02_0991 + 25079293-25079925,25080221-25081116,25081721-25082003     28   8.3  
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464...    28   8.3  
05_05_0311 - 24004380-24004440,24004685-24004756,24004875-240049...    28   8.3  
05_04_0213 + 19109369-19109581,19109803-19109873,19110175-191102...    28   8.3  

>07_03_1220 -
           24966169-24966327,24966421-24966552,24966639-24966693,
           24967496-24967667,24967771-24967918,24968015-24968050
          Length = 233

 Score =  313 bits (769), Expect = 1e-85
 Identities = 158/205 (77%), Positives = 172/205 (83%)
 Frame = +3

Query: 87  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 266
           ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 7   ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66

Query: 267 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 446
           RIRELTSVVQKRFN PE  VELYAEKV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 67  RIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126

Query: 447 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCXDYVNTATRHVLLRQGVLXI 626
           F+MESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P   Y+++A RHVLLRQGVL I
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGI 186

Query: 627 QGQIMLPVGTSXARTGPXKPPPXXI 701
           + +IML       + GP  P P  +
Sbjct: 187 KVKIMLD-WDPKGKQGPMTPLPDLV 210


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/76 (21%), Positives = 35/76 (46%)
 Frame = -2

Query: 617 YSLPEKHMSGSSVDVIXARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETEN 438
           + L +  + GS  +++   V R D +++Y+    G ++     +NN +++G   HD   N
Sbjct: 739 FKLNQVCIDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGN 798

Query: 437 TIASTTYSETSDKLVS 390
            I         ++ +S
Sbjct: 799 VIGQGDQDSEKNRYLS 814


>05_04_0322 +
           20239793-20240127,20240176-20240728,20241317-20241425,
           20244456-20244723,20244943-20245197,20245594-20246539
          Length = 821

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 344 GGYSWSLRYRPG-RISKIQAYRRSRCTSCLLWC 439
           G  SWS RY+    ISK   Y   RC  C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697


>09_06_0081 + 20745627-20748144,20748211-20748308
          Length = 871

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 20/77 (25%), Positives = 25/77 (32%)
 Frame = +1

Query: 550 TLETLAMITSTLLPDMCFSGKEYXESKVKSCCPWGPAXPERARXSPHQXXSLGDRSPKDX 729
           T  T+A++  T+ P        Y  +   S  P  P      R  PH     G   P   
Sbjct: 130 TPSTVALVGLTVSPTTARYSFSYGGASSSSAMPRAPTASLALRAPPHLRAPCGLAPPVPT 189

Query: 730 PPCPLXXDPATCAPXXP 780
           PP      P   AP  P
Sbjct: 190 PPALATHVPMPPAPAPP 206


>07_01_0214 +
           1595917-1596526,1597127-1597140,1598414-1598743,
           1598853-1598963,1599113-1599269,1603366-1603619,
           1603762-1603960,1604341-1604498
          Length = 610

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = -1

Query: 528 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 424
           T L  H   AA    Q H HGH      G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280


>12_02_0991 + 25079293-25079925,25080221-25081116,25081721-25082003
          Length = 603

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 640 CCPWGPAXPERARXSPHQXXSLGDRSPKDXPPCPLXXDPATCAPXXPRAXA 792
           CCP   A  +  + +PH     G+  P   PP P      T  P  P + A
Sbjct: 29  CCPSPAALHKSLKNNPHHHGGGGNHKP--PPPTPPPQQHKTTTPSAPPSRA 77


>08_02_0502 +
           17844775-17845092,17845528-17845634,17846039-17846492,
           17846623-17846694,17846804-17846925,17847079-17847294,
           17847392-17847500,17847618-17847730,17847916-17848063,
           17848274-17848396
          Length = 593

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = -2

Query: 209 ADGSDPHFHAGVAVLGQLPSEELIEFRLENPISNKFSLL*N---IVHGHDCNGSREKANL 39
           ADG  PH HA  A  G++   E +   ++ P+  +F+L  +    VH     G+ EK+ +
Sbjct: 56  ADGERPHGHAAEAGTGRMNLNEYM-VAVDRPLGVRFALAVDGRVFVHSLKKGGNAEKSRI 114


>05_05_0311 -
           24004380-24004440,24004685-24004756,24004875-24004946,
           24005155-24005298,24005535-24005606,24006057-24006286
          Length = 216

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -2

Query: 218 DLRADGSDPHFHAGVAVLGQLPSEELIEFRLENPISNKFSLL*NIVHGHDCNGS 57
           DL       H  A +A L QL   E+    +E PI  +F  L N++    CN +
Sbjct: 78  DLEEMNLSGHLSADLARLDQLQFMEIASNNIEGPIPPEFGNLENLISLDLCNNT 131


>05_04_0213 +
           19109369-19109581,19109803-19109873,19110175-19110229,
           19110441-19110626
          Length = 174

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 603 LRQGVLXIQGQIMLPVGTSXARTGPXKPPPXXIPG*QKPQG 725
           L +G+L  + Q+ +PVGT      P + PP  +P    P G
Sbjct: 37  LLRGLLETEAQLFVPVGTRSNHRSPYENPP--LPSNHNPIG 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,371,209
Number of Sequences: 37544
Number of extensions: 448004
Number of successful extensions: 1227
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)