Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J12
         (964 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031366-1|CAA20520.1|  809|Drosophila melanogaster EG:100G7.6 p...    31   2.4  
AE014298-475|AAF45833.2|  887|Drosophila melanogaster CG3588-PB,...    31   2.4  
L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike n...    30   5.5  
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro...    30   5.5  
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA...    30   5.5  

>AL031366-1|CAA20520.1|  809|Drosophila melanogaster EG:100G7.6
           protein.
          Length = 809

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 740 PPIXPSPXXPPPPXPXXXXXTP 805
           PP+ P P  PPPP P     TP
Sbjct: 667 PPVRPLPPPPPPPPPVPYPYTP 688


>AE014298-475|AAF45833.2|  887|Drosophila melanogaster CG3588-PB,
           isoform B protein.
          Length = 887

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 740 PPIXPSPXXPPPPXPXXXXXTP 805
           PP+ P P  PPPP P     TP
Sbjct: 807 PPVRPLPPPPPPPPPVPYPYTP 828


>L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike
           nuclear protein protein.
          Length = 857

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 731 EXXPPIXPSPXXPPPPXPXXXXXTP 805
           E  PP  P+P  PPPP P      P
Sbjct: 321 EAAPPTPPTPPSPPPPPPAPPVAAP 345


>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
           protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 731 EXXPPIXPSPXXPPPPXPXXXXXTP 805
           E  PP  P+P  PPPP P      P
Sbjct: 321 EAAPPTPPTPPSPPPPPPAPPVAAP 345


>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
           protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 731 EXXPPIXPSPXXPPPPXPXXXXXTP 805
           E  PP  P+P  PPPP P      P
Sbjct: 321 EAAPPTPPTPPSPPPPPPAPPVAAP 345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,620,332
Number of Sequences: 53049
Number of extensions: 122651
Number of successful extensions: 2181
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4812612705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)