Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J07
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12154-1|AAA59992.1|  738|Homo sapiens melanotransferrin protein.      32   2.0  
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.       30   8.2  
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.     30   8.2  

>M12154-1|AAA59992.1|  738|Homo sapiens melanotransferrin protein.
          Length = 738

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 234 LDCIPARDRMECLNYVQQXQADFVPVXPEDMYVAAK 341
           + C+ A+    C+  +Q  Q D V +  ED+Y A K
Sbjct: 395 IQCVSAKSPQHCMERIQAEQVDAVTLSGEDIYTAGK 430


>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 645 PKXXPXLGGPPKKXXFPFLXXXPPKXXPXSPP 740
           P   P  G PP +  FPF+   P    P  PP
Sbjct: 127 PNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158


>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
          Length = 1374

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 645 PKXXPXLGGPPKKXXFPFLXXXPPKXXPXSPP 740
           P   P  G PP +  FPF+   P    P  PP
Sbjct: 127 PNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPP 158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,986,231
Number of Sequences: 237096
Number of extensions: 2074104
Number of successful extensions: 4105
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3985
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)