Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J07
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    31   1.2  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U23455-3|AAC46531.1|   97|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical ...    28   8.7  

>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/62 (30%), Positives = 20/62 (32%)
 Frame = +2

Query: 602 FPKXFXPXXKGPPXPXXXPXXGRAPKKXXFPFFGXXXPKKXPLFPPXXXXXXXGPXXKXP 781
           +P    P   GPP P   P  G  P K   P F           PP       GP    P
Sbjct: 715 YPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGA---PPPPFGRGAGPMSSFP 771

Query: 782 PP 787
           PP
Sbjct: 772 PP 773


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/77 (27%), Positives = 22/77 (28%)
 Frame = +3

Query: 555 PXXPPRKKNXKPXXXXSXKXSXPXXRGPXXPKXXPXLGGPPKKXXFPFLXXXPPKXXPXS 734
           P  PP      P      K S P   GP  P   P    PP     P      P   P  
Sbjct: 206 PSGPPSPGPVDPSE--DPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGP 263

Query: 735 PPKXXXXXXGPXKXXPP 785
           P +      GP    PP
Sbjct: 264 PTRRPPGPPGPPTRRPP 280


>U23455-3|AAC46531.1|   97|Caenorhabditis elegans Hypothetical
           protein F55E10.2 protein.
          Length = 97

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 256 SLAGMQSSVTXGFGRNIHHVLTRFQVL*WHAYFICSFRCVHT 131
           SL G ++ +T     NIHH++    VL     ++CS  C  T
Sbjct: 11  SLGGTEADLTNLLNANIHHMVLILTVLSLLLLWLCSAFCKET 52


>AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical
           protein Y40B1A.5 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = +3

Query: 615 SXPXXRGPXXPKXXPXLGGPPKKXXFPFLXXXPPKXXPXSPP 740
           S P    P  P   P +GGPP    +      P    P  PP
Sbjct: 58  SLPPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPP 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,081,670
Number of Sequences: 27780
Number of extensions: 298192
Number of successful extensions: 655
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)