Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J06
         (871 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  31   7.2  
AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform p...    31   7.2  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                31   7.2  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    31   7.2  
AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.              31   7.2  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 417  RRRDCSPKPGMRVPVRLSPCPFTLSRASPAE---AALSLWRSLKSADPMAL 274
            R R  SP+   R P+R+SP   + +R SPA    A +S  R L+  D   L
Sbjct: 1355 RIRSLSPRSVSRSPIRMSPARMSPARMSPARMSPARMSPGRRLEETDESQL 1405


>AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform
            protein.
          Length = 5604

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 417  RRRDCSPKPGMRVPVRLSPCPFTLSRASPAE---AALSLWRSLKSADPMAL 274
            R R  SP+   R P+R+SP   + +R SPA    A +S  R L+  D   L
Sbjct: 1401 RIRSLSPRSVSRSPIRMSPARMSPARMSPARMSPARMSPGRRLEETDESQL 1451


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 417  RRRDCSPKPGMRVPVRLSPCPFTLSRASPAE---AALSLWRSLKSADPMAL 274
            R R  SP+   R P+R+SP   + +R SPA    A +S  R L+  D   L
Sbjct: 1401 RIRSLSPRSVSRSPIRMSPARMSPARMSPARMSPARMSPGRRLEETDESQL 1451


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 417  RRRDCSPKPGMRVPVRLSPCPFTLSRASPAE---AALSLWRSLKSADPMAL 274
            R R  SP+   R P+R+SP   + +R SPA    A +S  R L+  D   L
Sbjct: 1355 RIRSLSPRSVSRSPIRMSPARMSPARMSPARMSPARMSPGRRLEETDESQL 1405


>AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.
          Length = 5604

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 417  RRRDCSPKPGMRVPVRLSPCPFTLSRASPAE---AALSLWRSLKSADPMAL 274
            R R  SP+   R P+R+SP   + +R SPA    A +S  R L+  D   L
Sbjct: 1401 RIRSLSPRSVSRSPIRMSPARMSPARMSPARMSPARMSPGRRLEETDESQL 1451


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,710,419
Number of Sequences: 237096
Number of extensions: 2069345
Number of successful extensions: 19585
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19579
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)