Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_J04
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127769-1|AAI27770.1| 339|Homo sapiens transmembrane protein 1... 33 1.8
BC127768-1|AAI27769.1| 339|Homo sapiens transmembrane protein 1... 33 1.8
BC051850-1|AAH51850.1| 343|Homo sapiens transmembrane protein 1... 33 1.8
AF327923-1|AAK16442.1| 343|Homo sapiens transmembrane protein i... 33 1.8
AB065849-1|BAC06067.1| 314|Homo sapiens seven transmembrane hel... 32 2.3
BC117283-1|AAI17284.1| 676|Homo sapiens cancer susceptibility c... 31 4.1
BC117281-1|AAI17282.1| 676|Homo sapiens cancer susceptibility c... 31 4.1
BC057795-1|AAH57795.1| 716|Homo sapiens CASC1 protein protein. 31 4.1
BC047415-1|AAH47415.2| 676|Homo sapiens CASC1 protein protein. 31 4.1
BC028415-1|AAH28415.1| 690|Homo sapiens CASC1 protein protein. 31 4.1
AY423543-1|AAQ93499.1| 716|Homo sapiens lung adenoma susceptibi... 31 4.1
AF399636-1|AAK95121.1| 216|Homo sapiens olfactory receptor prot... 31 5.4
AB065852-1|BAC06070.1| 309|Homo sapiens seven transmembrane hel... 31 5.4
>BC127769-1|AAI27770.1| 339|Homo sapiens transmembrane protein 120B
protein.
Length = 339
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 228 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 320
FN LLV + L + +SI + N SR GWW+
Sbjct: 160 FNFLLVWYYCTLTIRESILISNGSRIKGWWV 190
>BC127768-1|AAI27769.1| 339|Homo sapiens transmembrane protein 120B
protein.
Length = 339
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 228 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 320
FN LLV + L + +SI + N SR GWW+
Sbjct: 160 FNFLLVWYYCTLTIRESILISNGSRIKGWWV 190
>BC051850-1|AAH51850.1| 343|Homo sapiens transmembrane protein 120A
protein.
Length = 343
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 228 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 320
FN LLV + L + +SI + N SR GWW+
Sbjct: 164 FNFLLVWYYCTLTIRESILINNGSRIKGWWV 194
>AF327923-1|AAK16442.1| 343|Homo sapiens transmembrane protein
induced by tumor necrosis factor alpha protein.
Length = 343
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 228 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 320
FN LLV + L + +SI + N SR GWW+
Sbjct: 164 FNFLLVWYYCTLTIRESILINNGSRIKGWWV 194
>AB065849-1|BAC06067.1| 314|Homo sapiens seven transmembrane helix
receptor protein.
Length = 314
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 563 STRTIIWLQLSKYHISFMSSSAEIYGTF-FRFCSNNVIIHEFFSE 432
+TR L + Y I F+++S +I TF FC +NVI H FF +
Sbjct: 135 TTRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSNVI-HHFFCD 178
>BC117283-1|AAI17284.1| 676|Homo sapiens cancer susceptibility
candidate 1 protein.
Length = 676
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 RAIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQS---GWWILLVTMALIAPAASEAGV 371
+ + T F + + LC+L SIK+K++ S G W+ + + A EAG+
Sbjct: 474 KVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFII---ALKEAGL 530
Query: 372 NLFNSR 389
N+F +R
Sbjct: 531 NIFPTR 536
>BC117281-1|AAI17282.1| 676|Homo sapiens cancer susceptibility
candidate 1 protein.
Length = 676
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 RAIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQS---GWWILLVTMALIAPAASEAGV 371
+ + T F + + LC+L SIK+K++ S G W+ + + A EAG+
Sbjct: 474 KVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFII---ALKEAGL 530
Query: 372 NLFNSR 389
N+F +R
Sbjct: 531 NIFPTR 536
>BC057795-1|AAH57795.1| 716|Homo sapiens CASC1 protein protein.
Length = 716
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 RAIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQS---GWWILLVTMALIAPAASEAGV 371
+ + T F + + LC+L SIK+K++ S G W+ + + A EAG+
Sbjct: 514 KVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFII---ALKEAGL 570
Query: 372 NLFNSR 389
N+F +R
Sbjct: 571 NIFPTR 576
>BC047415-1|AAH47415.2| 676|Homo sapiens CASC1 protein protein.
Length = 676
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 RAIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQS---GWWILLVTMALIAPAASEAGV 371
+ + T F + + LC+L SIK+K++ S G W+ + + A EAG+
Sbjct: 474 KVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFII---ALKEAGL 530
Query: 372 NLFNSR 389
N+F +R
Sbjct: 531 NIFPTR 536
>BC028415-1|AAH28415.1| 690|Homo sapiens CASC1 protein protein.
Length = 690
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 RAIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQS---GWWILLVTMALIAPAASEAGV 371
+ + T F + + LC+L SIK+K++ S G W+ + + A EAG+
Sbjct: 578 KVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFII---ALKEAGL 634
Query: 372 NLFNSR 389
N+F +R
Sbjct: 635 NIFPTR 640
>AY423543-1|AAQ93499.1| 716|Homo sapiens lung adenoma
susceptibility 1-like protein protein.
Length = 716
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 RAIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQS---GWWILLVTMALIAPAASEAGV 371
+ + T F + + LC+L SIK+K++ S G W+ + + A EAG+
Sbjct: 514 KVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFII---ALKEAGL 570
Query: 372 NLFNSR 389
N+F +R
Sbjct: 571 NIFPTR 576
>AF399636-1|AAK95121.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = -2
Query: 599 YFEYAVALAPRNSTRTII-----WLQLSKYHISFMSSSAEIYGTF-FRFCSNNVIIHEFF 438
Y YA P + T T+ L L Y F+++S I G F FC +N ++H FF
Sbjct: 53 YDRYAAVCKPLHYTTTMTASVGACLALGSYVCGFLNASFHIGGIFSLSFCKSN-LVHHFF 111
Query: 437 SEI 429
++
Sbjct: 112 CDV 114
>AB065852-1|BAC06070.1| 309|Homo sapiens seven transmembrane helix
receptor protein.
Length = 309
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = -2
Query: 599 YFEYAVALAPRNSTRTII-----WLQLSKYHISFMSSSAEIYGTF-FRFCSNNVIIHEFF 438
Y YA P + T T+ L L Y F+++S I G F FC +N ++H FF
Sbjct: 118 YDRYAAVCKPLHYTTTMTASVGACLALGSYVCGFLNASFHIGGIFSLSFCKSN-LVHHFF 176
Query: 437 SEI 429
++
Sbjct: 177 CDV 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,663,724
Number of Sequences: 237096
Number of extensions: 1951758
Number of successful extensions: 3797
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3797
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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