Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J04
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-1|CAA98073.3|  433|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum...    28   7.4  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    28   9.8  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    28   9.8  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    28   9.8  

>Z73899-1|CAA98073.3|  433|Caenorhabditis elegans Hypothetical
           protein ZK829.3 protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 486 PIYLCRARHEGDMILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNA 659
           P  L  A+  G+    +L P+YS     GS ++        +   +LID +   KFNA
Sbjct: 208 PWMLPEAKKRGEFDKLKLDPNYSKAGTEGSLTHCFLRYAPVVRKLTLID-LETLKFNA 264


>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
            homolog protein 1 protein.
          Length = 1722

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 24/93 (25%), Positives = 44/93 (47%)
 Frame = +3

Query: 102  ILAHRED*HIYRRTYWKNIF*KVLKKKTLSKCTRAIYTSCVKFNILLVSFNFFLCLLQSI 281
            I AH ++ HI+  T  K+     L KK L+  T +   +  KF+ ++   N+   +L   
Sbjct: 1034 IKAHSQNGHIFTLTIDKSTLSAYLFKKRLALATNSGSGTIQKFDSVIADGNWHQIILNPH 1093

Query: 282  KMKNRSRQSGWWILLVTMALIAPAASEAGVNLF 380
            K+   S      +  ++   + PA S++G +LF
Sbjct: 1094 KVLIDS------VKFISDNQLYPAESKSGASLF 1120


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +3

Query: 522 MILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARXHGAVASS 686
           +I GQ+KP+Y    +  S+   +     ++ N + ++ I + +  ++  G  AS+
Sbjct: 439 IIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLRLISKMRGVSAST 493


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +3

Query: 522 MILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARXHGAVASS 686
           +I GQ+KP+Y    +  S+   +     ++ N + ++ I + +  ++  G  AS+
Sbjct: 439 IIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLRLISKMRGVSAST 493


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +3

Query: 522 MILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARXHGAVASS 686
           +I GQ+KP+Y    +  S+   +     ++ N + ++ I + +  ++  G  AS+
Sbjct: 439 IIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLRLISKMRGVSAST 493


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,236,171
Number of Sequences: 27780
Number of extensions: 340615
Number of successful extensions: 901
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)