Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_J04
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          45   1e-06
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    28   0.13 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.4  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 44.8 bits (101), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
 Frame = +3

Query: 486 PIYLCRARHEGDMILGQLKPDYSSCAVS--GS-KSYSIFEVLENIENASLIDWIPWFKFN 656
           P+Y+CR  H    + G  + +   C V+  G+ +SY  +++LEN+ NA+ I+W    K+ 
Sbjct: 81  PLYVCRVLHTTVWVAGAQRGNEQRCTVTMHGTVQSYDKYDLLENVNNAARINWEYLDKYK 140

Query: 657 ARXHGAVASSFSDSVXIGRMKASSGYSHYIXRIVYESAIGRLITFDD 797
               GAVA   ++ + + R  A +  +    R  Y   IG L T D+
Sbjct: 141 PTPLGAVA---TEKMFVARHLAETPKNTSAVR--YTHYIGTLATNDN 182


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 228 FNILLVSFNFFLCLLQSIK-MKNRSRQSGWWILLVTMALIAPAASEAGVNLFNS 386
           FN++ +S + ++ + Q IK  K+++ +  W  +L+  A+ A   S   + L N+
Sbjct: 275 FNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTILLVWAISAAIGSPIVLGLNNT 328


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 107 SSPRRLTHISANLLEKYFLKSVEKKNI 187
           +SP   T  + NL+E+  L  +EK+N+
Sbjct: 27  ASPTLSTPPTLNLMEQILLAKIEKQNL 53


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 150 SNRFADICVNLLGELKYVRRNGKCVENRRSA 58
           S R +D C   L  +  V RN    ENRR++
Sbjct: 348 SRRHSDSCCLCLDSMNAVIRNFNESENRRNS 378


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 370 TPASDAAGAISAMVTSNIHQP 308
           T A DA G + A   SN+ QP
Sbjct: 204 TRAEDARGILEAARRSNLSQP 224


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 370 TPASDAAGAISAMVTSNIHQP 308
           T A DA G + A   SN+ QP
Sbjct: 294 TRAEDARGILEAARRSNLSQP 314


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = -2

Query: 545 WLQLSKYHISFMSSSAEIYGTFFRFCSNNVIIHE 444
           ++++  +H++ +      Y TF R C   +  HE
Sbjct: 314 FMRIFGHHLNRLGREISTYFTFTRPCGITLTFHE 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,340
Number of Sequences: 438
Number of extensions: 4000
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)