Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_J03
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 32 0.47
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 29 3.3
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.7
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 139 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 270
PT + T T TT T+ P TTT ET T +TT T T P
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTP 154
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 142 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVP 270
T T T TT T+ +P TTT T T +TT T T P
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP 241
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 139 PTLKETA-TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVP 270
PT TA T TT T+ P TTT + T T TT T T P
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTP 234
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 136 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRP 282
WP ET TT T+ +P TTT+ T T TT + T T P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 136 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRP 282
WP ET TT T+ +P TTT+ T T TT + T T P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 124 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVP 270
LC+LW L T T TT T+ + TTT + T T T T TVP
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVP 230
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 139 PTLKETATNLLTTARTSLILPKTTTLMET---ATNLSTTVHITWTVPKGRPY---FKPTP 300
PT AT +TT T+ P TTT+ T A ++TT I TVP + + KP P
Sbjct: 191 PTTTTIATTRITTKTTTSPPPFTTTVTTTTSAARTIATTTPIK-TVPPVKVFGKAIKPIP 249
Query: 301 FPG 309
PG
Sbjct: 250 TPG 252
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 142 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 270
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 142 TLKETATNLLTTARTSLILPKT---TTLMETATNLSTTVHITWTVPKG 276
T A N+ TT T+ I P T TT++ T T ++TT +P G
Sbjct: 31 TTTSPAPNITTTTTTTTIAPPTNTTTTILTTTTTVTTTTTSPPLIPDG 78
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 142 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTP 300
T T T TT T+ P TTT T T T P+G F TP
Sbjct: 62 TSTSTPTTTTTTTTTTTTTPTTTTTTTTTTTPEPTTTKVKVCPQGYTSFLRTP 114
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 128 QSEDENHEEFHFYMITSYHRRKILKLCSKILRNS 27
QS++ + +F F + +H R++L +ILRNS
Sbjct: 230 QSDENTYFQFDFIGVDGHHARRVLPPSWRILRNS 263
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 154 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTP 300
T T +T T+ P TTT E L+T TWT P + TP
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAPPTTTVKRTTP 677
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 154 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTP 300
T T +T T+ P TTT E L+T TWT P + TP
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAPPTTTVKRTTP 677
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +1
Query: 142 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTP 300
T T T TT T+ P TTT T T +TT T T P + TP
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTP 140
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 139 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT---VPKGRPYFKPT 297
PT TTA T++ PK TT + T T +TTV T T P+G F+PT
Sbjct: 169 PTTTTVRKTTQTTA-TTMTTPKPTTTVSTTT--TTTVPPTTTPKACPQGFVLFEPT 221
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 196 LPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGAR 315
+P T E A+ + T++ T PK P +P P PG R
Sbjct: 23 IPPTVFRFEKASKIGTSLD---TTPKELPIRRPVPLPGPR 59
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 196 LPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGAR 315
+P T E A+ + T++ T PK P +P P PG R
Sbjct: 23 IPPTVFRFEKASKIGTSLD---TTPKELPIRRPVPLPGPR 59
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 139 PTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTV 267
PT+ T T ++TT T + +P T + T TN ST V TV
Sbjct: 361 PTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTV 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,269,658
Number of Sequences: 27780
Number of extensions: 353009
Number of successful extensions: 1303
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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