Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_J01
(883 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.010
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.013
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.031
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.041
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.12
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.16
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.22
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.29
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.50
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.88
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 7.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.2
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = +1
Query: 427 GGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPF 606
GG P P P P+PPPP PPPPS P P P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMS-VPPPPSAPPMPAGPPSAPPPPLPA 1737
Query: 607 PPXXRXPTP 633
P P
Sbjct: 1738 SSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +2
Query: 782 AXPPXRXFXTPXAXLPPXXXPPXXPPXP------PPPPRP 883
A PP TP PP PP P PPPP P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.5 bits (78), Expect = 0.010
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -3
Query: 611 GGKGXXXXXXGGXRXGXGRXEGGGGXGGXXGGGGEGGXXRXTXVXXGVXGFFLGG 447
GG+G GG G G GGG G G GG GG G G GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/31 (54%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 581 GGXRXGXGRXEGG-GGXGGXXGG---GGEGG 501
GG R G G GG GG GG GG GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -3
Query: 632 GVGXRXXGGKGXXXXXXGGXRXGXGRXEGGGGXGGXXGGGGEGG 501
G G G +G G R G G GG G GG +GG
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = -3
Query: 611 GGKGXXXXXXGGX---RXGXGRXEGGGGXGGXXGG-GGEGG 501
GG+G GG R G G GG GG G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.013
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3
Query: 626 GXRXXGGKGXXXXXXGGXRXGXGRXEGG-GGXGGXXG--GGGEGG 501
G GG+G GG G G EGG GG GG G GGG GG
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 611 GGKGXXXXXXGGXRXGXGRXEGGGGXGGXXGG-GGEGG 501
GG G GG G G GGG GG GG GG GG
Sbjct: 235 GGPGGFGGGPGGFGGGLGGF--GGGPGGFGGGPGGHGG 270
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.031
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPP-PPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRX 624
PP P P + + P +PP PP P PP P+ P PP P PP
Sbjct: 428 PPSLPPSAPPS--LPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP----AAPAPPPAPA 481
Query: 625 PTP 633
P P
Sbjct: 482 PAP 484
Score = 32.7 bits (71), Expect = 0.071
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 502 PPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPP 612
PP P PP PP PP P P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 397 SXXPXXXPXXGGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPP-PSXRP 561
S P P G PP P P + P +PP P P PPP P+ P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLP-PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.88
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRP-XPXLXPPXQXXXXPFPPXXRX 624
PP P P + L + PP P PPS P P PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 625 PTP 633
P P
Sbjct: 448 PLP 450
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/55 (27%), Positives = 18/55 (32%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPP 612
PP P + + L PP PP P + R P L P PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 529 PPXPPPPSXRPXPXLXPPXQXXXXPFPPXXR 621
PP PPPP + P Q P PP R
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/85 (22%), Positives = 27/85 (31%)
Frame = +1
Query: 367 KSPKKXXKKKSXXPXXXPXXGGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPP 546
+ P++ + P P G PP +P + P+ PP PPP
Sbjct: 240 RPPERVPSLSAPAPPPIPPPSNGTVSSPPN----SPPRPIAPVSMNPAINSTSKPPLPPP 295
Query: 547 PSXRPXPXLXPPXQXXXXPFPPXXR 621
S L + P PP R
Sbjct: 296 SSRVSAAALAANKKRPPPPPPPSRR 320
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +1
Query: 454 KKKPXTPXXTXVXLXXPP----SPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXR 621
K+ P P + PP S PP PPP S PP P PP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 622 XPT 630
P+
Sbjct: 369 APS 371
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 508 SPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRXPTP 633
S PP PP PP + P PP P P P
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.041
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 8/83 (9%)
Frame = +1
Query: 418 PXXGGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRP--------XPXL 573
P G PK P PP P P P PPPS P P +
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 574 XPPXQXXXXPFPPXXRXPTPXXT 642
PP P P P P T
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPT 1233
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 502 PPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRXPTP 633
PP P P P PPPS P P P P P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAP-PVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +1
Query: 418 PXXGGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXR---PXPXLXPPXQ 588
P G PK P + PP P P PP P P P P PP
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 589 XXXXPFPP 612
PP
Sbjct: 1144 KPSVAAPP 1151
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +1
Query: 451 PKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFP-PXXRXP 627
PK P PP P P PP P P S P P P P P P
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Query: 628 T 630
+
Sbjct: 1075 S 1075
Score = 29.5 bits (63), Expect = 0.66
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 PPKKKPXTPXX-TXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRX 624
PP KP V PP P P P P PS P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP-PVPKPSVAAPPVPAPSSGIP 1179
Query: 625 PTP 633
P P
Sbjct: 1180 PVP 1182
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 PPKKKPX-TPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRX 624
PP P P + PP P P P P P+ P + PP + P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG-VPPVPPPSEAPPVPKPSVGVP 1208
Query: 625 PTP 633
P P
Sbjct: 1209 PVP 1211
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXP-PXQXXXXPFP-PXXR 621
PP P T + PP P P PPP P + P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 622 XPTP 633
P P
Sbjct: 1092 PPVP 1095
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +1
Query: 397 SXXPXXXPXXGGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLX 576
S P G PP + P P + + PP PPP P P PS P
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPSEAPPVPKPS---VGVPPVPPP-STAPPVPTPSAGLPPVPV 1231
Query: 577 PPXQXXXXPFP 609
P + P P
Sbjct: 1232 PTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/82 (24%), Positives = 21/82 (25%)
Frame = +1
Query: 388 KKKSXXPXXXPXXGGGGXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXP 567
K S P P P P PP P P P P PS P
Sbjct: 1054 KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV-AVP 1112
Query: 568 XLXPPXQXXXXPFPPXXRXPTP 633
+ P P P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 PPKKKPX-TPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRX 624
PP P P + PP P P PP P PS P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPP-VPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 625 PTP 633
P P
Sbjct: 1190 PVP 1192
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.12
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXP--PXPPPPSXRPXPXLXPPXQXXXXPFPPXXR 621
PP P P S PPP P P PPS P PP P PP +
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP-PPLSQ 208
Query: 622 XP 627
P
Sbjct: 209 AP 210
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXP 603
P P TP L P S PP P P P S P P PP P
Sbjct: 125 PSAPAPPTPQSE---LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 29.5 bits (63), Expect = 0.66
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 505 PSPPPPXXPPXPPPPSXRPXPXL 573
P+PPPP PP P P + P P L
Sbjct: 3 PAPPPP--PPAPAPAAAAPAPPL 23
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 502 PPSPPPP-XXPPXPPPPSXRPXPXLXPPXQXXXXPFP 609
P +P PP PP S P P + PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 502 PPSPPPPXXPPX--PPPPSXRPX-PXLXPPXQXXXXPFPPXXRXP 627
PP+P PP PP PS P P PP P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 770 SXXXAXPPXRXFXTPXAXLPPXXXPPXXPPXPPPPP 877
S A P TP + L P P P PPP P
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSP 154
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 502 PPSPPPPXXPPXPPPPSXRPXP 567
P +PPPP PP PPS P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 30.7 bits (66), Expect = 0.29
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 502 PPSPPPPXXPPXPPPPSXRP 561
PP PPP PP PPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 508 SPPPPXXPPXPPPPSXRPXPXLXPP 582
S PP PP PPPP P PP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPP 27
Score = 30.3 bits (65), Expect = 0.38
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 812 PXAXLPPXXXPPXXPPXPPPP 874
P PP PP PP PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 517 PPXXPPXPPPPSXRPXPXLXPPXQXXXXPFP 609
PP PP PPPP P PP Q P P
Sbjct: 5 PPGNPPPPPPP-----PGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 7/29 (24%)
Frame = +2
Query: 818 AXLPPXXXPPXXPP-------XPPPPPRP 883
A LPP PP PP PPPPP P
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 502 PPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRXP 627
PP PPPP PPP P P + P P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPP----SXRPXPXLXPP 582
PP P + PP P PP PPPP P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 508 SPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPP 612
SPPPP P P+ P P + PP P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPP 764
Score = 29.1 bits (62), Expect = 0.88
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 768 LPXXAPXPRXGLSXPPXPRSXXXXXXPPXLPXXPPPPA 881
+P P P G PP P PP P PPPPA
Sbjct: 749 IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP--PPPPA 784
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 788 PPXRXFXTPXAXLPPXXXPPXXPPXPPPPP 877
PP P PP PP PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 8/55 (14%)
Frame = +1
Query: 493 LXXPPSPPP--------PXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRXPTP 633
L PP PPP P P PPP P PP PP P P
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Frame = +2
Query: 788 PPXRXFXTPXAXLPPXXXPPXXP--PXPPPPPRP 883
PP P P PP P PPPPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 791 PXRXFXTPXAXLPPXXXPPXXPPXPPPPPRP 883
P F P A P P P PPPPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +1
Query: 436 GXXXPPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPX 615
G P+ P L PP PPPP PP S P P PP
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP 275
Query: 616 XRXPT 630
P+
Sbjct: 276 PATPS 280
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 448 PPKKKPXTPXXTXVXLXXPPSPPPPXXPPXPP 543
PP +P + L +PPPP PP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPP--PPPPP 197
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 824 LPPXXXPPXXPPXPPPPPRP 883
+PP P P P PPP P
Sbjct: 223 IPPTYTPKQADPLPAPPPPP 242
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 812 PXAXLPPXXXPPXXPPXPPPPPRP 883
P P P PP PPPP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLP 247
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.50
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = -3
Query: 626 GXRXXGGKGXXXXXXGGXRXGXGRXE----GGGGXGGXXGG---GGEGG 501
G GG+G GG R G G GGG GG GG G GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 626 GXRXXGGKGXXXXXXGGXRXGXGRXEGGGGXGGXXGGGGEG 504
G R G GG R G G GG GG GG G
Sbjct: 149 GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 505 PSPPPPXXPPXPPPPSXRPXPXLXP 579
P PPPP P PPS P L P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPP 1906
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +1
Query: 472 PXXTXVXLXXPPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPP 612
P V P P PP P P PS P + + P PP
Sbjct: 592 PPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPP 638
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/44 (27%), Positives = 15/44 (34%)
Frame = +1
Query: 502 PPSPPPPXXPPXPPPPSXRPXPXLXPPXQXXXXPFPPXXRXPTP 633
P +P P P P PP+ P + P PP P
Sbjct: 668 PAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPPLPPHDETQEP 711
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 22.6 bits (46), Expect(2) = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 517 PPXXPPXPPPPS 552
PP PP PPPPS
Sbjct: 306 PP--PPPPPPPS 315
Score = 21.4 bits (43), Expect(2) = 7.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 493 LXXPPSPPPP 522
L PP PPPP
Sbjct: 305 LPPPPPPPPP 314
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 620 RXXGGKGXXXXXXGGXRXGXGRXEGGGGXGGXXGGGGEGGXXR 492
R GG GG GR GGG G GG G R
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNR 486
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.141 0.472
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,415,653
Number of Sequences: 5004
Number of extensions: 18791
Number of successful extensions: 425
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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