Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_I24
(1129 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.055
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.092
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.51
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.51
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.90
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 2.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.7
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 4.0
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 8.4
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 8.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.4
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.055
Identities = 31/144 (21%), Positives = 34/144 (23%), Gaps = 2/144 (1%)
Frame = +1
Query: 703 PPPPPXXXXFFXGG-GAGPXXQXTPPPXXXXXXXXXXXPRPPXXSFFFFXXPPPXXXXXX 879
PPPPP G P + PPP PP S PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 880 XXXXXXXXXLXXSXXXPXXPPPPPPPXPXXPPPXXXXXXXXXXXXXXXXXXP-XPXXPXP 1056
L + P P PP P PP P P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 1057 XXXXXXKXHXPXXXXXXPXXPPSP 1128
P P PP+P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 0.90
Identities = 33/146 (22%), Positives = 33/146 (22%), Gaps = 2/146 (1%)
Frame = +1
Query: 697 PXPPPPPXXXXFFXG--GGAGPXXQXTPPPXXXXXXXXXXXPRPPXXSFFFFXXPPPXXX 870
P PPPPP G PPP P PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGR----SAPPPPPP 366
Query: 871 XXXXXXXXXXXXLXXSXXXPXXPPPPPPPXPXXPPPXXXXXXXXXXXXXXXXXXPXPXXP 1050
L S PP PPP P P P P P
Sbjct: 367 RSAPSTGRQPPPLSSSRAV-SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP-PSLP 424
Query: 1051 XPXXXXXXKXHXPXXXXXXPXXPPSP 1128
P P PP P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 999 PXPAPPXPXPXPPPPXPPS 1055
P P PP P PP PPS
Sbjct: 416 PVPTPPSLPPSAPPSLPPS 434
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPS 1055
P P P P PPPP PP+
Sbjct: 225 PTYTPKQADPLPAPPPPPPPT 245
Score = 27.9 bits (59), Expect(2) = 0.092
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 937 PPPPPPPXPXXPP 975
P PPPPP P PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect(2) = 0.20
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 937 PPPPPPPXP 963
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 999 PXPAPPXPXPXPPPPXPPSP 1058
P A P P P PPPP P
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPP 1037
P P P PP P PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 0.20
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 940 PPPPPPXPXXPPP 978
P PPPP P PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 0.092
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 916 SXXXPXXPPPPPP 954
S P PPPPPP
Sbjct: 185 SDYNPPPPPPPPP 197
Score = 21.4 bits (43), Expect(2) = 4.4
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +3
Query: 1011 PPXPXPXPPPPXPPS 1055
PP P PP PP+
Sbjct: 273 PPPPATPSQPPRPPT 287
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.51
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPSP 1058
P P APP P PPP P +P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAP 180
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPP 1052
P P P PP P P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 928 PXXPPPPPPPXPXXPPP 978
P PPPPP P P P
Sbjct: 3 PAPPPPPPAPAPAAAAP 19
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 999 PXPAPPXPXPXPPPPXPPSP 1058
P PP P PPPP +P
Sbjct: 191 PSAVPPMPPKVPPPPLSQAP 210
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.51
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPSP 1058
P P P P PPPP PP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXP 1049
P P PAP P PPPP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPSP 1058
P P P PP PPP PP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +3
Query: 993 PXPXPA-PPXPXPXPPPPXPPSP 1058
P P P PP P PPP PP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 6/63 (9%)
Frame = +1
Query: 652 PPPLXWXXFXXPGXXPXPPP------PPXXXXFFXGGGAGPXXQXTPPPXXXXXXXXXXX 813
PPP P P PPP PP GAGP PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYA 794
Query: 814 PRP 822
P P
Sbjct: 795 PAP 797
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
Frame = +1
Query: 928 PXXPPPPP------PPXPXXPPP 978
P PPPPP PP P PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 993 PXPXPAP--PXPXPXPPPPXPPSP 1058
P P PA P P P P P PP+P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 26.2 bits (55), Expect = 8.4
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 652 PPPLXWXXFXXPGXXPXPPPPPXXXXFFXGGGAGPXXQXTPPPXXXXXXXXXXXPRPPXX 831
PPP P P P PPP GG P PPP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIM----GGPPP---PPPPPGVAGAGPPPPPPPPPAV 785
Query: 832 S 834
S
Sbjct: 786 S 786
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.90
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 928 PXXPPPPPPPXPXXPP 975
P PPPPPPP PP
Sbjct: 6 PGNPPPPPPPPGFEPP 21
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPSP 1058
P P P PP P PP PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 928 PXXPPPPPPPXPXXPPP 978
P PPPPPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 685 PGXXPXPPPPPXXXXFFXGGGAGPXXQXTPPP 780
PG P PPPPP G P Q PPP
Sbjct: 6 PGNPPPPPPPP---------GFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPSP 1058
P P PP P PP PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Frame = +1
Query: 928 PXXPPPPP---PPXPXXPPP 978
P PPPPP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Frame = +1
Query: 928 PXXPPPP---PPPXPXXPPP 978
P PPPP PP P PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPSP 1058
P P APP P P P PP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 999 PXPAPPXPXPXPPPPXPPSP 1058
P P PP PPP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMP 1724
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 937 PPPPPPPXPXXPPP 978
P PPPPP PPP
Sbjct: 1705 PTPPPPPMSVPPPP 1718
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPS 1055
P P PP P P P PPS
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPS 1729
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPS 1055
P P P P PPPP P S
Sbjct: 1718 PSAPPMPAGPPSAPPPPLPAS 1738
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPPPXPPS 1055
P P APP P P PP P S
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKS 1055
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 928 PXXPPPPPPPXP 963
P PPPPPPP P
Sbjct: 942 PAFPPPPPPPPP 953
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 1032 PPPPXPPSP 1058
PPPP PP P
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 7.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 685 PGXXPXPPPPP 717
P P PPPPP
Sbjct: 942 PAFPPPPPPPP 952
Score = 22.2 bits (45), Expect(2) = 4.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 1011 PPXPXPXPPPP 1043
P P P PPPP
Sbjct: 942 PAFPPPPPPPP 952
Score = 21.8 bits (44), Expect(2) = 7.1
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 697 PXPPPPPXXXXFFXGG 744
P PPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 1057 GXGGXGGGGXGXGXGGAGXGXG 992
G GG GG G G GGA G G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRG 48
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.0 bits (52), Expect(2) = 4.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1020 PXPXPPPPXPPSP 1058
P PPPP PP P
Sbjct: 218 PVKKPPPPAPPKP 230
Score = 20.6 bits (41), Expect(2) = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPPP 1040
P P + P P PPP
Sbjct: 178 PLPTASANAPLPVPPP 193
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 1051 GGXGGGGXGXGXGGAGXG 998
GG GG G G G GGAG G
Sbjct: 226 GGLGGAGLG-GLGGAGLG 242
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 8.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 937 PPPPPPPXP 963
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 4/24 (16%)
Frame = +3
Query: 993 PXPXPAPPXPXPXPP----PPXPP 1052
P PAPP P P P PP PP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -1
Query: 1057 GXGGXGG--GGXGXGXGGAGXG 998
G GG GG GG G G GGA G
Sbjct: 461 GFGGRGGFGGGRGRGRGGARSG 482
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,935,523
Number of Sequences: 5004
Number of extensions: 28406
Number of successful extensions: 431
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 599646782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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